RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 GLIS3Q8NEA6 775 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 OLIG1Q8TAK6 271 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 HMGB4Q8WW32 186 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 HPS3Q969F9 1004 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 DNAI2Q9GZS0 605 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 DPEP3Q9H4B8 488 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 FBXO44Q9H4M3 255 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 VRTNQ9H8Y1 702 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 DEC1Q9P2X7 70 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 HOOK1Q9UJC3 728 aaKnown RBP13.13□□□□□ -0.31
MRPL55-209ENST00000366735 LSM7Q9UK45 103 aaKnown RBP13.13□□□□□ -0.31
MRPL55-209ENST00000366735 USP24Q9UPU5 2620 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 A0A0A0MRY4 1105 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 PVALEFA0A1B0GWK0 134 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 TBC1D3BA6NDS4 549 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 SGK1O00141 431 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 CLDN5O00501 218 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 POLR2DO15514 142 aaKnown RBP13.12□□□□□ -0.31
MRPL55-209ENST00000366735 TGFB1I1O43294 461 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 COCHO43405 550 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 ACTN4O43707 911 aaKnown RBP13.12□□□□□ -0.31
MRPL55-209ENST00000366735 CST3P01034 146 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-209ENST00000366735 SLFN14P0C7P3 912 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 RDXP35241 583 aaKnown RBP13.12□□□□□ -0.31
MRPL55-209ENST00000366735 HOXD13P35453 343 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 SLC5A3P53794 718 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 MYL6P60660 151 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 KNOP1Q1ED39 458 aaKnown RBP13.12□□□□□ -0.31
MRPL55-209ENST00000366735 BMT2Q1RMZ1 405 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 ANO4Q32M45 955 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 UAP1L1Q3KQV9 507 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 LY6G5CQ5SRR4 150 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 SNX30Q5VWJ9 437 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 SDE2Q6IQ49 451 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 RHBDF2Q6PJF5 856 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 UNQ6494/PRO21346Q6UXR6 183 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 TMEM92Q6UXU6 159 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-209ENST00000366735 TERB1Q8NA31 727 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 CEP76Q8TAP6 659 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 SCFD1Q8WVM8 642 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 CCDC34Q96HJ3 373 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 XPO6Q96QU8 1125 aaKnown RBP13.12□□□□□ -0.31
MRPL55-209ENST00000366735 B3GNT5Q9BYG0 378 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 GRPEL1Q9HAV7 217 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.12□□□□□ -0.311e-6■■■■■ 55.8
MRPL55-209ENST00000366735 TLR8Q9NR97 1041 aaKnown RBP13.12□□□□□ -0.31
MRPL55-209ENST00000366735 KRT82Q9NSB4 513 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 KIAA1468Q9P260 1216 aa13.12□□□□□ -0.31
MRPL55-209ENST00000366735 SCAMP3O14828 347 aaKnown RBP13.11□□□□□ -0.31
MRPL55-209ENST00000366735 AP1G2O75843 785 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 DEKP35659 375 aaKnown RBP13.11□□□□□ -0.31
MRPL55-209ENST00000366735 KIR2DL1P43626 348 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-209ENST00000366735 SLC6A11P48066 632 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 CACNA2D1P54289 1103 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 TYRO3Q06418 890 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 NCOA4Q13772 614 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 C10orf76Q5T2E6 689 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 GRAMD4Q6IC98 578 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 SASS6Q6UVJ0 657 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 SCARA5Q6ZMJ2 495 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 C12orf40Q86WS4 652 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 CEP57L1Q8IYX8 460 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 HDDC3Q8N4P3 179 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 ADAM33Q9BZ11 813 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 IMPG2Q9BZV3 1241 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 XYLT2Q9H1B5 865 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 SPHK2Q9NRA0 654 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 PCDH15Q96QU1 1955 aa13.11□□□□□ -0.31
MRPL55-209ENST00000366735 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 PATE3B3GLJ2 98 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 TLR5O60602 858 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 ZNF217O75362 1048 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 TULP3O75386 442 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 CFIP05156 583 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 IRF1P10914 325 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 HOXB2P14652 356 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 IRX4P78413 519 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 RPL6Q02878 288 aaKnown RBP13.1□□□□□ -0.31
MRPL55-209ENST00000366735 EHHADHQ08426 723 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 DUOXA1Q1HG43 343 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 TMCO4Q5TGY1 634 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 SLC23A3Q6PIS1 610 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 ARMCX6Q7L4S7 300 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 ETFBKMTQ8IXQ9 262 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 TMEFF1Q8IYR6 380 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 RLN3Q8WXF3 142 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 TAF4BQ92750 862 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 TMEM121BQ9BXQ6 578 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-209ENST00000366735 SMYD3Q9H7B4 428 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 SLC39A2Q9NP94 309 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 EXOC1Q9NV70 894 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 TMEM30AQ9NV96 361 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 GMIPQ9P107 970 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 NME7Q9Y5B8 376 aa13.1□□□□□ -0.31
MRPL55-209ENST00000366735 PCNX2A6NKB5 2137 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 FAM92AA1XBS5 289 aa13.09□□□□□ -0.31
MRPL55-209ENST00000366735 CDX4O14627 284 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms