RNA–Protein interactions for RNA: ENST00000364587.1

SNORA55-201, Transcript of small nucleolar RNA, H/ACA box 55, humanhuman

BASIC

Gene SNORA55, Length 135 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA55-201ENST00000364587 STON1Q9Y6Q2 735 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 TSPAN3O60637 253 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 FSBPO95073 299 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 OLFM2O95897 454 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 ABL1P00519 1130 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 MBL2P11226 248 aaPredicted RBP9.41□□□□□ -0.9
SNORA55-201ENST00000364587 TNFRSF8P28908 595 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 ACSL1P33121 698 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 TXKP42681 527 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 MATR3P43243 847 aaKnown RBP eCLIP9.41□□□□□ -0.9
SNORA55-201ENST00000364587 NPTX2P47972 431 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 PPP3CCP48454 512 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 ARRB1P49407 418 aaPredicted RBP9.41□□□□□ -0.9
SNORA55-201ENST00000364587 RACK1P63244 317 aaKnown RBP9.41□□□□□ -0.9
SNORA55-201ENST00000364587 SHBQ15464 509 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 SKIDA1Q1XH10 827 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 IGF2-ASQ6U949 168 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 PIK3AP1Q6ZUJ8 805 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 PTRH1Q86Y79 214 aaKnown RBP9.41□□□□□ -0.9
SNORA55-201ENST00000364587 TRIM22Q8IYM9 498 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 SGF29Q96ES7 293 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 SLC46A1Q96NT5 459 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 RWDD1Q9H446 243 aaPredicted RBP9.41□□□□□ -0.9
SNORA55-201ENST00000364587 ZNF768Q9H5H4 540 aaKnown RBP9.41□□□□□ -0.9
SNORA55-201ENST00000364587 TUFT1Q9NNX1 390 aa9.41□□□□□ -0.9
SNORA55-201ENST00000364587 ZFHX3Q15911 3703 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 ZNF840PA6NDX5 716 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 CSO75390 466 aaKnown RBP9.4□□□□□ -0.9
SNORA55-201ENST00000364587 MED24O75448 989 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 EPHA8P29322 1005 aaPredicted RBP9.4□□□□□ -0.9
SNORA55-201ENST00000364587 TAF6P49848 677 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 BCAT1P54687 386 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 MYL7Q01449 175 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 SSRP1Q08945 709 aaKnown RBP9.4□□□□□ -0.9
SNORA55-201ENST00000364587 BNIP3Q12983 259 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 STRN3Q13033 797 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 CLN3Q13286 438 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 PDIA5Q14554 519 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 CALCRLQ16602 461 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 CDCP2Q5VXM1 449 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 CACUL1Q86Y37 369 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 SPATA2LQ8IUW3 424 aaPredicted RBP9.4□□□□□ -0.9
SNORA55-201ENST00000364587 FAM177A1Q8N128 213 aaPredicted RBP9.4□□□□□ -0.9
SNORA55-201ENST00000364587 SPATA20Q8TB22 786 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 ACBD6Q9BR61 282 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 KMT5AQ9NQR1 393 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 GEMIN8Q9NWZ8 242 aaKnown RBP9.4□□□□□ -0.9
SNORA55-201ENST00000364587 ARHGAP28Q9P2N2 729 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 GTF3C4Q9UKN8 822 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 SH3BP1Q9Y3L3 701 aa9.4□□□□□ -0.9
SNORA55-201ENST00000364587 NEDD8-MDP1E9PL57 170 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 DEXIO95424 95 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 SEMA4FO95754 770 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 DGKGP49619 791 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 COPAP53621 1224 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 USP46P62068 366 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 MCL1Q07820 350 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 NUMA1Q14980 2115 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 PROX2Q3B8N5 592 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 ADCK5Q3MIX3 580 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 CFAP221Q4G0U5 840 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 C3orf38Q5JPI3 329 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 JADE1Q6IE81 842 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 Q6ZUG5 572 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 DENND5BQ6ZUT9 1274 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 KANSL1Q7Z3B3 1105 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 BBS7Q8IWZ6 715 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 BRF1Q92994 677 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 FAM212AQ96EL1 285 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 CCSER1Q9C0I3 900 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 BTBD1Q9H0C5 482 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 GDF3Q9NR23 364 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 TMPRSS4Q9NRS4 437 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 EHD2Q9NZN4 543 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 ATXN7L1Q9ULK2 861 aaPredicted RBP9.39□□□□□ -0.91
SNORA55-201ENST00000364587 KCNJ14Q9UNX9 436 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 SATB2Q9UPW6 733 aa9.39□□□□□ -0.91
SNORA55-201ENST00000364587 ARID1BQ8NFD5 2236 aaPredicted RBP9.38□□□□□ -0.91
SNORA55-201ENST00000364587 KPNA7A9QM74 516 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 NPC1O15118 1278 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 OPA1O60313 960 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 CACNG3O60359 315 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 OAS1P00973 400 aaKnown RBP9.38□□□□□ -0.91
SNORA55-201ENST00000364587 HMGB1P09429 215 aaKnown RBP9.38□□□□□ -0.91
SNORA55-201ENST00000364587 TYRP14679 529 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 CASRP41180 1078 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 CCT2P78371 535 aaKnown RBP9.38□□□□□ -0.91
SNORA55-201ENST00000364587 DAB2P98082 770 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 TBR1Q16650 682 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 KYAT1Q16773 422 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 INTS6LQ5JSJ4 861 aaKnown RBP9.38□□□□□ -0.91
SNORA55-201ENST00000364587 SFMBT2Q5VUG0 894 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 ZPBP2Q6X784 338 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 TICAM1Q8IUC6 712 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 CD302Q8IX05 232 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 ZNF564Q8TBZ8 553 aaPredicted RBP9.38□□□□□ -0.91
SNORA55-201ENST00000364587 FUBP3Q96I24 572 aaKnown RBP eCLIP9.38□□□□□ -0.91
SNORA55-201ENST00000364587 SPATA17Q96L03 361 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 ORAI3Q9BRQ5 295 aa9.38□□□□□ -0.91
SNORA55-201ENST00000364587 BBS2Q9BXC9 721 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms