RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 PHF21BQ96EK2 531 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 CDK5RAP3Q96JB5 506 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 SLITRK1Q96PX8 696 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 VN1R3Q9BXE9 311 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 RBM38Q9H0Z9 239 aaKnown RBP2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 PAPOLBQ9NRJ5 636 aaKnown RBP2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 PLK2Q9NYY3 685 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 FZD4Q9ULV1 537 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 PRKAB1Q9Y478 270 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 MMP24Q9Y5R2 645 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 A0A087WWL8 130 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 A0A087WYN8 130 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 TRBV5-3A0A0A0MS03 114 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 GABRDO14764 452 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 SPRY2O43597 315 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 LDB3O75112 727 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 VNN1O95497 513 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 HOXC6P09630 235 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 MYBL2P10244 700 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 CD19P15391 556 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 TIAL1Q01085 375 aaKnown RBP eCLIP2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 SLC14A1Q13336 389 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 PTGR1Q14914 329 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 KHDC1LQ5JSQ8 128 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 SRGAP1Q7Z6B7 1085 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 PNPLA1Q8N8W4 532 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 PCSK9Q8NBP7 692 aaKnown RBP2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 BPIFB1Q8TDL5 484 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 ASB5Q8WWX0 329 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 NUAK2Q9H093 628 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 CNNM1Q9NRU3 951 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 HIF1ANQ9NWT6 349 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 AGO2Q9UKV8 859 aaKnown RBP2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 EVPLQ92817 2033 aa2.71□□□□□ -1.98
RNU6-238P-201ENST00000363313 TMEM272A0A1B0GTI8 110 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 H3BUI4 141 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 GRID2O43424 1007 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 ATG13O75143 517 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 ZNF432O94892 652 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 MT-CO1P00395 513 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 UQCRC1P31930 480 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 MTHFSP49914 203 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 DSCR9P59020 149 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 POU3F1Q03052 451 aaPredicted RBP2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 CCDC6Q16204 474 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 KRT71Q3SY84 523 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 PLA1AQ53H76 456 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 LMBRD2Q68DH5 695 aaPredicted RBP2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 RTL10Q7L3V2 364 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 PNMA8AQ86V59 439 aaPredicted RBP2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 MSI2Q96DH6 328 aaKnown RBP2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 TRMT61AQ96FX7 289 aaKnown RBP2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 SLC35A4Q96G79 324 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 CDCP1Q9H5V8 836 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 RMI1Q9H9A7 625 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 ZNF556Q9HAH1 456 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 GBA2Q9HCG7 927 aaPredicted RBP2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 PIH1D1Q9NWS0 290 aaKnown RBP2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 MSRB1Q9NZV6 116 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 NKX1-2Q9UD57 310 aaPredicted RBP2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 SPEF1Q9Y4P9 236 aa2.7□□□□□ -1.98
RNU6-238P-201ENST00000363313 A0A1B0GUV1 79 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 TLDC2A0PJX2 215 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 PODXLO00592 558 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 CLSTN1O94985 981 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 POU2F2P09086 479 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 PKMP14618 531 aaKnown RBP2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 TFEBP19484 476 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 RPS6KB1P23443 525 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 RFX2P48378 723 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 PCBP2Q15366 365 aaKnown RBP eCLIP2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 ST3GAL2Q16842 350 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 INSCQ1MX18 579 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 SLC4A8Q2Y0W8 1093 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 WASHC2DQ5SRD0 308 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 TMEM199Q8N511 208 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 KBTBD7Q8WVZ9 684 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 TM2D2Q9BX73 214 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 C6orf106Q9H6K1 298 aaPredicted RBP2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 LPAR3Q9UBY5 353 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 RGS17Q9UGC6 210 aaPredicted RBP2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 KCNG2Q9UJ96 466 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 PCDHA6Q9UN73 950 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 COG5Q9UP83 839 aa2.69□□□□□ -1.98
RNU6-238P-201ENST00000363313 CLEC18AA5D8T8 446 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 RHCEP18577 417 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 HOXA7P31268 230 aaPredicted RBP2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 ARFIP2P53365 341 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 PPATQ06203 517 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 PGS1Q32NB8 556 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 MORC1Q86VD1 984 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 DNAJC5GQ8N7S2 189 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 CLEC18CQ8NCF0 446 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 TMEM171Q8WVE6 324 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 LPAR1Q92633 364 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 FCRL5Q96RD9 977 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 PIMREGQ9BSJ6 248 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 DPH1Q9BZG8 443 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 TM6SF1Q9BZW5 370 aa2.68□□□□□ -1.98
RNU6-238P-201ENST00000363313 TASP1Q9H6P5 420 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms