RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 YJEFN3A6XGL0 299 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 E7ENQ6 273 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 TRAPPC3O43617 180 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 SETSIPP0DME0 302 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 ACADSBP45954 432 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 TUSC3Q13454 348 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 ZSCAN26Q16670 478 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 ARL13BQ3SXY8 428 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 CENPUQ71F23 418 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 LRRC8DQ7L1W4 858 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 CCDC185Q8N715 623 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 CCDC63Q8NA47 563 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 ATP6V1G3Q96LB4 118 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.1□□□□□ -0.476e-7■■■■□ 21.6
HPS1-204ENST00000361490 GIT1Q9Y2X7 761 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 EEF2KO00418 725 aaKnown RBP12.1□□□□□ -0.47
HPS1-204ENST00000361490 PIRO00625 290 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 SPAG7O75391 227 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 MTA2O94776 668 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 STK10O94804 968 aaKnown RBP12.1□□□□□ -0.47
HPS1-204ENST00000361490 SLC4A1P02730 911 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
HPS1-204ENST00000361490 BFSP2Q13515 415 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 HIF1AQ16665 826 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 SLC24A5Q71RS6 500 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 KBTBD7Q8WVZ9 684 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 HIPK3Q9H422 1215 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 PRM3Q9NNZ6 103 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 TMEM39AQ9NV64 488 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 TMEM59LQ9UK28 342 aa12.1□□□□□ -0.47
HPS1-204ENST00000361490 TPX2Q9ULW0 747 aaKnown RBP12.1□□□□□ -0.47
HPS1-204ENST00000361490 A0A0U1RQF3 1178 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 MSI1O43347 362 aaKnown RBP12.09□□□□□ -0.47
HPS1-204ENST00000361490 CDKN2BP42772 138 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 VCPP55072 806 aaKnown RBP12.09□□□□□ -0.47
HPS1-204ENST00000361490 GDF10P55107 478 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 IRX4P78413 519 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 GBE1Q04446 702 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 ERMARDQ5T6L9 678 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 ZNF784Q8NCA9 323 aaPredicted RBP12.09□□□□□ -0.47
HPS1-204ENST00000361490 MICAL1Q8TDZ2 1067 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 TMEM174Q8WUU8 243 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 DUSP16Q9BY84 665 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 GRIN2DO15399 1336 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 C2CD4BA6NLJ0 364 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 AGPSO00116 658 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 MDM4O15151 490 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 LIASO43766 372 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 MAGEA4P43358 317 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 HADHBP55084 474 aaKnown RBP12.09□□□□□ -0.47
HPS1-204ENST00000361490 IFI35P80217 286 aaPredicted RBP12.09□□□□□ -0.47
HPS1-204ENST00000361490 UBAP2Q5T6F2 1119 aaKnown RBP12.09□□□□□ -0.47
HPS1-204ENST00000361490 BBOF1Q8ND07 529 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 SEPT8Q92599 483 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 ATXN7L3BQ96GX2 97 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 PEBP4Q96S96 227 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 LGMNQ99538 433 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 PABPC3Q9H361 631 aaKnown RBP12.09□□□□□ -0.47
HPS1-204ENST00000361490 VIPAS39Q9H9C1 493 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 DERAQ9Y315 318 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 LAMA2P24043 3122 aaKnown RBP12.09□□□□□ -0.47
HPS1-204ENST00000361490 DICER1Q9UPY3 1922 aaKnown RBP12.09□□□□□ -0.47
HPS1-204ENST00000361490 H0YHG0 523 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 AVILO75366 819 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 RAB27AP51159 221 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 EFEMP1Q12805 493 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 PCBP1Q15365 356 aaKnown RBP eCLIP12.09□□□□□ -0.47
HPS1-204ENST00000361490 TTMPQ5BVD1 217 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 ECHDC2Q86YB7 292 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 IQCGQ9H095 443 aaKnown RBP12.09□□□□□ -0.47
HPS1-204ENST00000361490 LRRC19Q9H756 370 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 CRTAC1Q9NQ79 661 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 CWC15Q9P013 229 aaKnown RBP12.09□□□□□ -0.47
HPS1-204ENST00000361490 TXNDC16Q9P2K2 825 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 PAPPA2Q9BXP8 1791 aa12.09□□□□□ -0.47
HPS1-204ENST00000361490 E2F8A0AVK6 867 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 NRP1O14786 923 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 USP12O75317 370 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 CABYRO75952 493 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 SSTR1P30872 391 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 DENND5BQ6ZUT9 1274 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 C4orf33Q8N1A6 199 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 SLC35F5Q8WV83 523 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 ARHGEF2Q92974 986 aaKnown RBP12.08□□□□□ -0.48
HPS1-204ENST00000361490 CAVIN3Q969G5 261 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 ZNF512Q96ME7 567 aaPredicted RBP12.08□□□□□ -0.48
HPS1-204ENST00000361490 ALG13Q9NP73 1137 aaKnown RBP12.08□□□□□ -0.48
HPS1-204ENST00000361490 NKIRAS1Q9NYS0 192 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 PCYOX1Q9UHG3 505 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 CNTN6Q9UQ52 1028 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 FAM169AQ9Y6X4 670 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 LTFP02788 710 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 IVLP07476 585 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 SPATA31D3P0C874 917 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 PTGIRP43119 386 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 TLE2Q04725 743 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 GAD2Q05329 585 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 ENPEPQ07075 957 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 ZNF844Q08AG5 666 aa12.08□□□□□ -0.48
HPS1-204ENST00000361490 INCA1Q0VD86 236 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms