RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 STK10O94804 968 aaKnown RBP16.83■□□□□ 0.29
IFT140-201ENST00000361339 LYNP07948 512 aa16.83■□□□□ 0.29
IFT140-201ENST00000361339 ESRRAP11474 423 aaPredicted RBP16.83■□□□□ 0.29
IFT140-201ENST00000361339 ARF4P18085 180 aaPredicted RBP16.83■□□□□ 0.29
IFT140-201ENST00000361339 GJA5P36382 358 aa16.83■□□□□ 0.29
IFT140-201ENST00000361339 TRABD2AQ86V40 505 aa16.83■□□□□ 0.29
IFT140-201ENST00000361339 RFX6Q8HWS3 928 aa16.83■□□□□ 0.29
IFT140-201ENST00000361339 IGDCC3Q8IVU1 814 aa16.83■□□□□ 0.29
IFT140-201ENST00000361339 OPTNQ96CV9 577 aa16.83■□□□□ 0.29
IFT140-201ENST00000361339 BTBD10Q9BSF8 475 aa16.83■□□□□ 0.29
IFT140-201ENST00000361339 MAK16Q9BXY0 300 aaKnown RBP16.83■□□□□ 0.29
IFT140-201ENST00000361339 PDZD7Q9H5P4 517 aa16.83■□□□□ 0.29
IFT140-201ENST00000361339 ETNK2Q9NVF9 386 aa16.83■□□□□ 0.29
IFT140-201ENST00000361339 AVILO75366 819 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 FAM102AQ5T9C2 384 aaPredicted RBP16.83■□□□□ 0.28
IFT140-201ENST00000361339 IFT43Q96FT9 208 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 DNAJC1Q96KC8 554 aaKnown RBP16.83■□□□□ 0.28
IFT140-201ENST00000361339 CCDC22O60826 627 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 AP3M2P53677 418 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 YWHAEP62258 255 aaKnown RBP16.83■□□□□ 0.28
IFT140-201ENST00000361339 ZRSR2Q15696 482 aaKnown RBP16.83■□□□□ 0.28
IFT140-201ENST00000361339 FAXCQ5TGI0 409 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 PLPPR4Q7Z2D5 763 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 FBXO27Q8NI29 283 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 SH3TC2Q8TF17 1288 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 AFG1LQ8WV93 481 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 BCO2Q9BYV7 579 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 GALNT8Q9NY28 637 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 HES2Q9Y543 173 aa16.83■□□□□ 0.28
IFT140-201ENST00000361339 LMNAP02545 664 aaKnown RBP16.82■□□□□ 0.28
IFT140-201ENST00000361339 PGM1P36871 562 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 GRM1Q13255 1194 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 STAT4Q14765 748 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 LRRC38Q5VT99 294 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 ILDR2Q71H61 639 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 KCTD6Q8NC69 237 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 HIPK4Q8NE63 616 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 NKD2Q969F2 451 aaPredicted RBP16.82■□□□□ 0.28
IFT140-201ENST00000361339 ZNF184Q99676 751 aaPredicted RBP16.82■□□□□ 0.28
IFT140-201ENST00000361339 NME7Q9Y5B8 376 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 NR2E3Q9Y5X4 410 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 RPS6KL1Q9Y6S9 549 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 CCDC160A6NGH7 325 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 E5RJQ4 531 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 HNRNPRO43390 633 aaKnown RBP16.82■□□□□ 0.28
IFT140-201ENST00000361339 CILPO75339 1184 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 TCEA3O75764 348 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 TFE3P19532 575 aaPredicted RBP16.82■□□□□ 0.28
IFT140-201ENST00000361339 ADCYAP1R1P41586 468 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 NDST1P52848 882 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 KDSRQ06136 332 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 ARHGAP1Q07960 439 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 BBS9Q3SYG4 887 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 C1orf228Q6PIY5 440 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 ARMCX2Q7L311 632 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 TRIM56Q9BRZ2 755 aaKnown RBP16.82■□□□□ 0.28
IFT140-201ENST00000361339 FAM49BQ9NUQ9 324 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 CHCHD3Q9NX63 227 aaKnown RBP16.82■□□□□ 0.28
IFT140-201ENST00000361339 TAS2R1Q9NYW7 299 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 TNFSF13BQ9Y275 285 aa16.82■□□□□ 0.28
IFT140-201ENST00000361339 LGALS2P05162 132 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 ENO1P06733 434 aaKnown RBP16.81■□□□□ 0.28
IFT140-201ENST00000361339 TROVE2P10155 538 aaKnown RBP eCLIP16.81■□□□□ 0.28
IFT140-201ENST00000361339 GPD2P43304 727 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 BASP1P80723 227 aaKnown RBP16.81■□□□□ 0.28
IFT140-201ENST00000361339 PDK4Q16654 411 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 OLFML2BQ68BL8 750 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 CYP4V2Q6ZWL3 525 aaPredicted RBP16.81■□□□□ 0.28
IFT140-201ENST00000361339 NIPA2Q8N8Q9 360 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 NETO2Q8NC67 525 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 GATA6Q92908 595 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 TMEM176AQ96HP8 235 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 CFAP57Q96MR6 1250 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 C2orf40Q9H1Z8 148 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 SMARCAD1Q9H4L7 1026 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 SLC17A7Q9P2U7 560 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 FARP1Q9Y4F1 1045 aaPredicted RBP16.81■□□□□ 0.28
IFT140-201ENST00000361339 H3BRJ5 948 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 TXNDC9O14530 226 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 ITGAVP06756 1048 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 NR1H3Q13133 447 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 DYNC1I2Q13409 638 aaKnown RBP16.81■□□□□ 0.28
IFT140-201ENST00000361339 CCDC142Q17RM4 750 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 GLRA4Q5JXX5 417 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 ERO1BQ86YB8 467 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 BBOF1Q8ND07 529 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 CDCA5Q96FF9 252 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 HPDLQ96IR7 371 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 TRAPPC9Q96Q05 1148 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 B3GNT5Q9BYG0 378 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 ZNF518BQ9C0D4 1074 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.81■□□□□ 0.28
IFT140-201ENST00000361339 CLIC5Q9NZA1 410 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 RNF181Q9P0P0 153 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 KANSL3Q9P2N6 904 aa16.81■□□□□ 0.28
IFT140-201ENST00000361339 OR6B1O95007 311 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 IREB2P48200 963 aaKnown RBP16.8■□□□□ 0.28
IFT140-201ENST00000361339 ATXN1P54253 815 aaKnown RBP16.8■□□□□ 0.28
IFT140-201ENST00000361339 HIF1AQ16665 826 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 DRICH1Q6PGQ1 229 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms