RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 KRT37O76014 449 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 TRUB2O95900 331 aaKnown RBP11.3□□□□□ -0.6
RPE-202ENST00000359429 GSRP00390 522 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 BPGMP07738 259 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 SERPINA6P08185 405 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 CCND2P30279 289 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 ARL2P36404 184 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 CCNFP41002 786 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 ASPAP45381 313 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 CDH8P55286 799 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 DNAL1Q4LDG9 190 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 XKR3Q5GH77 459 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 CFAP157Q5JU67 520 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 ATG16L1Q676U5 607 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 CYP4V2Q6ZWL3 525 aaPredicted RBP11.3□□□□□ -0.6
RPE-202ENST00000359429 PDSS2Q86YH6 399 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 CRLF3Q8IUI8 442 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 BRSK2Q8IWQ3 736 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 ADGRF2Q8IZF7 708 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 NDUFAF2Q8N183 169 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 TTLL6Q8N841 843 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 NCSTNQ92542 709 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 PPP2R3CQ969Q6 453 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 APOL6Q9BWW8 343 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 SHCBP1LQ9BZQ2 653 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 GPAMQ9HCL2 828 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 S100A14Q9HCY8 104 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 MAP3K20Q9NYL2 800 aaKnown RBP11.3□□□□□ -0.6
RPE-202ENST00000359429 ADAMTS6Q9UKP5 1117 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.29□□□□□ -0.6
RPE-202ENST00000359429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.29□□□□□ -0.6
RPE-202ENST00000359429 CHADO15335 359 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 PDE5AO76074 875 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 PRKCHP24723 683 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 NAMPTP43490 491 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 C6orf163Q5TEZ5 329 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 TRNP1Q6NT89 227 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 C16orf46Q6P387 395 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 KYAT3Q6YP21 454 aaKnown RBP11.29□□□□□ -0.6
RPE-202ENST00000359429 DENND5BQ6ZUT9 1274 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 MPP5Q8N3R9 675 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 OR6Y1Q8NGX8 325 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 FNIP1Q8TF40 1166 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 FAM172AQ8WUF8 416 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 ATG4CQ96DT6 458 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 XYLT2Q9H1B5 865 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 DHX33Q9H6R0 707 aaKnown RBP11.29□□□□□ -0.6
RPE-202ENST00000359429 DMAP1Q9NPF5 467 aaPredicted RBP11.29□□□□□ -0.6
RPE-202ENST00000359429 RNF146Q9NTX7 359 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 NXF1Q9UBU9 619 aaKnown RBP11.29□□□□□ -0.6
RPE-202ENST00000359429 DNAJB4Q9UDY4 337 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 ARHGAP42A6NI28 874 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 SLC15A5A6NIM6 579 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 H7C0C1 242 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 PIK3R2O00459 728 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 KCNN4O15554 427 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 ATP5OP48047 213 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 AQP4P55087 323 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 CDH6P55285 790 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 PEX6Q13608 980 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 CCNIQ14094 377 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 HNRNPDQ14103 355 aaKnown RBP11.29□□□□□ -0.6
RPE-202ENST00000359429 DPY19L2Q6NUT2 758 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 RSBN1LQ6PCB5 846 aaPredicted RBP11.29□□□□□ -0.6
RPE-202ENST00000359429 UNC5AQ6ZN44 842 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 KRT27Q7Z3Y8 459 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 RASSF3Q86WH2 238 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 WDR49Q8IV35 697 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 EZH1Q92800 747 aaPredicted RBP11.29□□□□□ -0.6
RPE-202ENST00000359429 C1orf21Q9H246 121 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.29□□□□□ -0.6
RPE-202ENST00000359429 ZNF180Q9UJW8 692 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 SOX13Q9UN79 622 aa11.29□□□□□ -0.6
RPE-202ENST00000359429 A6NJR5 290 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 SPAG6O75602 509 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 ENDOD1O94919 500 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 APRTP07741 180 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 AOC1P19801 751 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 PEX2P28328 305 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 RBL1P28749 1068 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 EPHB1P54762 984 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 TFAMQ00059 246 aaKnown RBP11.28□□□□□ -0.6
RPE-202ENST00000359429 ASPHQ12797 758 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 DLG1Q12959 904 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 STX3Q13277 289 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 CAPSQ13938 189 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 RABGAP1LQ5R372 815 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 MAVSQ7Z434 540 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 DHDDSQ86SQ9 333 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 SESTD1Q86VW0 696 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 UNC5BQ8IZJ1 945 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 STKLD1Q8NE28 680 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 HIPK4Q8NE63 616 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 PIWIL1Q96J94 861 aaKnown RBP11.28□□□□□ -0.6
RPE-202ENST00000359429 TWNKQ96RR1 684 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 GMLQ99445 158 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 NDNQ99608 321 aa11.28□□□□□ -0.6
RPE-202ENST00000359429 XAB2Q9HCS7 855 aaKnown RBP11.28□□□□□ -0.6
RPE-202ENST00000359429 SLC17A6Q9P2U8 582 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms