RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TRIP13Q15645 432 aaPredicted RBP13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 SLC45A4Q5BKX6 768 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 IZUMO3Q5VZ72 239 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 FAM47EQ6ZV65 393 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 NECAB2Q7Z6G3 386 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 KCNV2Q8TDN2 545 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 LINC01599Q8WXQ3 324 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 CFAP57Q96MR6 1250 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 PPCSQ9HAB8 311 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 SSU72Q9NP77 194 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 SAR1AQ9NR31 198 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 CNTN3Q9P232 1028 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 HAO1Q9UJM8 370 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 ANAPC7Q9UJX3 599 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 ZMYND8Q9ULU4 1186 aaPredicted RBP13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 A0A0U1RQF3 1178 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 PTGESO14684 152 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 ASS1P00966 412 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 LMNAP02545 664 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 ATF7P17544 494 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 IGFBP6P24592 240 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 TARSP26639 723 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 RAD23BP54727 409 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 DNAJC3Q13217 504 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 TMED2Q15363 201 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 ZC3H12AQ5D1E8 599 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 LONP2Q86WA8 852 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 MCOLN2Q8IZK6 566 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 C9orf72Q96LT7 481 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 TTC25Q96NG3 672 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 SH3GL3Q99963 347 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 PLEKHA5Q9HAU0 1116 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 GRID1Q9ULK0 1009 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 C2CD2Q9Y426 696 aa13.22□□□□□ -0.29
RTFDC1-202ENST00000357348 ANKRD33BA6NCL7 494 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 ARL5CA6NH57 179 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 PITPNM1O00562 1244 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 C2CD2LO14523 706 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 PSTPIP1O43586 416 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 TYROBPO43914 113 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 ITGB8P26012 769 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 PTPN4P29074 926 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 SSTR3P32745 418 aaPredicted RBP13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 CDH8P55286 799 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 CUL2Q13617 745 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 LMNTD2Q8IXW0 634 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 GSTCDQ8NEC7 633 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 CXorf38Q8TB03 319 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 TRIM11Q96F44 468 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 XYLT2Q9H1B5 865 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 TANC1Q9C0D5 1861 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 EME2A4GXA9 379 aaPredicted RBP13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 DPPA5A6NC42 116 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 PROSCO94903 275 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 CLTBP09497 229 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 FGFR1P11362 822 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 ORC1Q13415 861 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 CTC1Q2NKJ3 1217 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 DRICH1Q6PGQ1 229 aaPredicted RBP13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 TMEM270Q6UE05 265 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 ZNF365Q70YC5 407 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 KATNAL2Q8IYT4 538 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 BEST2Q8NFU1 509 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 HPDLQ96IR7 371 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 TOX2Q96NM4 488 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 NUDCD1Q96RS6 583 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 RBM15Q96T37 977 aaKnown RBP eCLIP13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 FAM167BQ9BTA0 163 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 SEZ6LQ9BYH1 1024 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 TRABDQ9H4I3 376 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 SQORQ9Y6N5 450 aa13.21□□□□□ -0.29
RTFDC1-202ENST00000357348 DNALI1O14645 258 aaPredicted RBP13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 RALAP11233 206 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 ZBTB6Q15916 424 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 PLEKHG4Q58EX7 1191 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 ZNF667Q5HYK9 610 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 ENOSF1Q7L5Y1 443 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 PRUNE1Q86TP1 453 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 ZNF677Q86XU0 584 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 HACE1Q8IYU2 909 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 FAM136AQ96C01 138 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 PAAF1Q9BRP4 392 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 DENND2DQ9H6A0 471 aaPredicted RBP13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 DCLRE1BQ9H816 532 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 RSAD1Q9HA92 442 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 SLCO1B3Q9NPD5 702 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 RGS18Q9NS28 235 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 UBQLN1Q9UMX0 589 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 ASB3Q9Y575 518 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 PCDHB4Q9Y5E5 795 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 EXOC1LA0A1B0GW35 172 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 CASTOR2A6NHX0 329 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 SIGLEC16A6NMB1 481 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 ZC3H11AO75152 810 aaKnown RBP eCLIP13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 EPHB2P29323 1055 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 PTDSS1P48651 473 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 GCNT1Q02742 428 aa13.2□□□□□ -0.3
RTFDC1-202ENST00000357348 LLGL1Q15334 1064 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms