RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PRKACBP22694 351 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 FAUP35544 74 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ACAP1Q15027 740 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 STK11Q15831 433 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ADSSL1Q8N142 457 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ANKFN1Q8N957 763 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 POC5Q8NA72 575 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 TMEM94Q12767 1356 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 OR14I1A6ND48 311 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ADAM10O14672 748 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 IL1BP01584 269 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 TSHRP16473 764 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 GNA11P29992 359 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 FDFT1P37268 417 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PTPN5P54829 565 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF827Q17R98 1081 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 FAM47EQ6ZV65 393 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RBFAQ8N0V3 343 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ADCY4Q8NFM4 1077 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 GANCQ8TET4 914 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SRPK1Q96SB4 655 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 TTLL13PA6NNM8 815 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PICALMQ13492 652 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 DSG2Q14126 1118 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 LONRF1Q17RB8 773 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 TRIM67Q6ZTA4 783 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ADAM32Q8TC27 787 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CORO2AQ92828 525 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZDHHC12Q96GR4 267 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 MS4A14Q96JA4 679 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 KCTD5Q9NXV2 234 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SLC7A8Q9UHI5 535 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PLAAQ9Y263 795 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 AP1M2Q9Y6Q5 423 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 VWA3AA6NCI4 1184 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ORC5O43913 435 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CCNA2P20248 432 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SLC39A6Q13433 755 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 HECTD3Q5T447 861 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 NAT14Q8WUY8 206 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 NSL1Q96IY1 281 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PLEKHA8Q96JA3 519 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 LAD1O00515 517 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ALX3O95076 343 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 NOS3P29474 1203 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CD40LGP29965 261 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 MARCKSP29966 332 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CDH18Q13634 790 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PTPAQ15257 358 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SCARA3Q6AZY7 606 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RFKQ969G6 155 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 GCOM2Q9BZD3 368 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PKIBQ9C010 78 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZBTB21Q9ULJ3 1066 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 KIAA0100Q14667 2235 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ARHGEF37A1IGU5 675 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 H3BQF6 201 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZBTB7BO15156 539 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZMYND10O75800 440 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 LDHAP00338 332 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 HLA-DPA1P20036 260 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 NCAPHQ15003 741 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 AP1S3Q96PC3 154 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF700Q9H0M5 742 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 NCOA5Q9HCD5 579 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 TRMT13Q9NUP7 481 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RAPGEFL1Q9UHV5 662 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SMCO3A2RU48 225 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 MCIDASD6RGH6 385 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 UBAP1LF5GYI3 381 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CRYZL1O95825 349 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SLC4A1P02730 911 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RALBP11234 206 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CA4P22748 312 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RTN1Q16799 776 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 FERMT3Q86UX7 667 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 IFNL2Q8IZJ0 200 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 MAGEE2Q8TD90 523 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 MIPEPQ99797 713 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 TMBIM4Q9HC24 238 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 NSFL1CQ9UNZ2 370 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 UBE2QL1A1L167 161 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CASC3O15234 703 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 RPS6KA4O75676 772 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 KCNA6P17658 529 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TRAF3Q13114 568 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 NR1I3Q14994 352 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 DLG2Q15700 870 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ZC3H12BQ5HYM0 836 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CCDC116Q8IYX3 515 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ACTRT1Q8TDG2 376 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PHOX2BQ99453 314 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CNNM1Q9NRU3 951 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MDM4O15151 490 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 FAM13AO94988 1023 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MAGEA1P43355 309 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MAGOHP61326 146 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 LACC1Q8IV20 430 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PPP1R13LQ8WUF5 828 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 GMIPQ9P107 970 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms