RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 GPRIN1Q7Z2K8 1008 aa19■□□□□ 0.63
USF2-202ENST00000343550 TTC30AQ86WT1 665 aa19■□□□□ 0.63
USF2-202ENST00000343550 RBBP8NLQ8NC74 664 aaPredicted RBP19■□□□□ 0.63
USF2-202ENST00000343550 OVCA2Q8WZ82 227 aa19■□□□□ 0.63
USF2-202ENST00000343550 ZSWIM1Q9BR11 485 aa19■□□□□ 0.63
USF2-202ENST00000343550 FBXO44Q9H4M3 255 aa19■□□□□ 0.63
USF2-202ENST00000343550 TSPAN16Q9UKR8 245 aa19■□□□□ 0.63
USF2-202ENST00000343550 ANAPC1Q9H1A4 1944 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 TRAV19A0A0A6YYK7 116 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 SYCE3A1L190 88 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 CKMP06732 381 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 ZNF18P17022 549 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 HDCP19113 662 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 ATXN1P54253 815 aaKnown RBP18.99■□□□□ 0.63
USF2-202ENST00000343550 MTF1Q14872 753 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 CNGA2Q16280 664 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 SNX30Q5VWJ9 437 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 PKN3Q6P5Z2 889 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 AOPEPQ8N6M6 819 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 ARL14EPQ8N8R7 260 aaPredicted RBP18.99■□□□□ 0.63
USF2-202ENST00000343550 FBXO32Q969P5 355 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 RNF38Q9H0F5 515 aa18.99■□□□□ 0.63
USF2-202ENST00000343550 CDV3Q9UKY7 258 aaKnown RBP18.99■□□□□ 0.63
USF2-202ENST00000343550 O00370 1275 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 LRP3O75074 770 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 ATG13O75143 517 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 ABL1P00519 1130 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 CALCAP01258 141 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 PFKLP17858 780 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 GALK1P51570 392 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 KIF11P52732 1056 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 ZNF77Q15935 545 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 ARHGAP44Q17R89 818 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 GOLGA7BQ2TAP0 167 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 LCLAT1Q6UWP7 414 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 WDR5BQ86VZ2 330 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 TTC16Q8NEE8 873 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 PDZD8Q8NEN9 1154 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 OSCP1Q8WVF1 389 aa18.98■□□□□ 0.63
USF2-202ENST00000343550 FBRSL1Q9HCM7 1045 aaKnown RBP18.98■□□□□ 0.63
USF2-202ENST00000343550 DUS2Q9NX74 493 aaKnown RBP18.98■□□□□ 0.63
USF2-202ENST00000343550 LIMA1Q9UHB6 759 aaKnown RBP18.98■□□□□ 0.63
USF2-202ENST00000343550 KIF26AQ9ULI4 1882 aaPredicted RBP18.97■□□□□ 0.63
USF2-202ENST00000343550 EGFP01133 1207 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 ZDHHC11BP0C7U3 371 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 KRT5P13647 590 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 CDK11BP21127 795 aaKnown RBP18.97■□□□□ 0.63
USF2-202ENST00000343550 GJA4P35212 333 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 PGFP49763 221 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 ZNF165P49910 485 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 SLC8A3P57103 927 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 PDE4CQ08493 712 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 PKDCCQ504Y2 493 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 CEP68Q76N32 757 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.97■□□□□ 0.63
USF2-202ENST00000343550 PIGZQ86VD9 579 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 DHX40Q8IX18 779 aaKnown RBP18.97■□□□□ 0.63
USF2-202ENST00000343550 CPA6Q8N4T0 437 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 UBA3Q8TBC4 463 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 ECT2Q9H8V3 914 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 HESX1Q9UBX0 185 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 DNAJC12Q9UKB3 198 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 SCML2Q9UQR0 700 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 USP3Q9Y6I4 520 aa18.97■□□□□ 0.63
USF2-202ENST00000343550 SMTNL1A8MU46 457 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 BECN2A8MW95 431 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 OAS1P00973 400 aaKnown RBP18.96■□□□□ 0.63
USF2-202ENST00000343550 DRD1P21728 446 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 BRD2P25440 801 aaKnown RBP18.96■□□□□ 0.63
USF2-202ENST00000343550 COPB1P53618 953 aaKnown RBP18.96■□□□□ 0.63
USF2-202ENST00000343550 BCAT1P54687 386 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 RAB41Q5JT25 222 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 SHC3Q92529 594 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 ATP2A3Q93084 1043 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 EXOC4Q96A65 974 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 P2RY13Q9BPV8 354 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 SEMA4GQ9NTN9 838 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 GMIPQ9P107 970 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 AJAP1Q9UKB5 411 aaPredicted RBP18.96■□□□□ 0.63
USF2-202ENST00000343550 SLC8A2Q9UPR5 921 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 WNT6Q9Y6F9 365 aa18.96■□□□□ 0.63
USF2-202ENST00000343550 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.96■□□□□ 0.63
USF2-202ENST00000343550 TULP2O00295 520 aa18.95■□□□□ 0.62
USF2-202ENST00000343550 XPO1O14980 1071 aaKnown RBP18.95■□□□□ 0.62
USF2-202ENST00000343550 RNF40O75150 1001 aa18.95■□□□□ 0.62
USF2-202ENST00000343550 OLFM2O95897 454 aa18.95■□□□□ 0.62
USF2-202ENST00000343550 TPM2P07951 284 aa18.95■□□□□ 0.62
USF2-202ENST00000343550 IFNAR2P48551 515 aa18.95■□□□□ 0.62
USF2-202ENST00000343550 PXNP49023 591 aaPredicted RBP18.95■□□□□ 0.62
USF2-202ENST00000343550 PDE6CP51160 858 aa18.95■□□□□ 0.62
USF2-202ENST00000343550 BST2Q10589 180 aaKnown RBP18.95■□□□□ 0.62
USF2-202ENST00000343550 USP4Q13107 963 aa18.95■□□□□ 0.62
USF2-202ENST00000343550 STILQ15468 1287 aa18.95■□□□□ 0.62
USF2-202ENST00000343550 KLHDC7AQ5VTJ3 777 aa18.95■□□□□ 0.62
USF2-202ENST00000343550 NAIF1Q69YI7 327 aaPredicted RBP18.95■□□□□ 0.62
USF2-202ENST00000343550 SMYD5Q6GMV2 418 aa18.95■□□□□ 0.62
USF2-202ENST00000343550 APTXQ7Z2E3 356 aaKnown RBP18.95■□□□□ 0.62
USF2-202ENST00000343550 FAM160A2Q8N612 972 aaPredicted RBP18.95■□□□□ 0.62
USF2-202ENST00000343550 ANKRD20A12PQ8NF67 263 aa18.95■□□□□ 0.62
USF2-202ENST00000343550 SH3RF2Q8TEC5 729 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms