RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 DDI1Q8WTU0 396 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 WNK4Q96J92 1243 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CNPY3Q9BT09 278 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 ABI2Q9NYB9 513 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CD274Q9NZQ7 290 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 FAM198AQ9UFP1 575 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF229Q9UJW7 825 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 SLC13A4Q9UKG4 626 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 PRG3Q9Y2Y8 225 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 ZC3H4Q9UPT8 1303 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CCDC189A1A4V9 331 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 E9PBE3 544 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 F8VP50 259 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 PSMD3O43242 534 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 KLHL41O60662 606 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 PIAS1O75925 651 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 ADRB2P07550 413 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 EIF2B2P49770 351 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CNTN2Q02246 1040 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 LRRC8BQ6P9F7 803 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 B3GNT6Q6ZMB0 384 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 MARK2Q7KZI7 788 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 SHCBP1Q8NEM2 672 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 TCP10LQ8TDR4 215 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 TSPAN17Q96FV3 270 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 PWWP2AQ96N64 755 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 NDEL1Q9GZM8 345 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 RUVBL2Q9Y230 463 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 SDR42E2A6NKP2 422 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 VWA5AO00534 786 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 MAP4P27816 1152 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CSE1LP55060 971 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 MAP3K7CLP57077 242 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 C1QBPQ07021 282 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 MYBPC2Q14324 1141 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 NFIL3Q16649 462 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 DACT2Q5SW24 774 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 NAPEPLDQ6IQ20 393 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 SLC26A11Q86WA9 606 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 EIF1ADQ8N9N8 165 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF512Q96ME7 567 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 GLIS2Q9BZE0 524 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 MUC3BQ9H195 1237 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 RUBCNLQ9H714 662 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CHST12Q9NRB3 414 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 UBQLN1Q9UMX0 589 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 DNALI1O14645 258 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CYP2F1P24903 491 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 RPS12P25398 132 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 PTPN7P35236 360 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 FLT3P36888 993 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 FDFT1P37268 417 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CDC42EP1Q00587 391 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 TWF1Q12792 350 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 MTFR1Q15390 333 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 TRIM16LQ309B1 348 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 GNASQ5JWF2 1037 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CES3Q6UWW8 571 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 TSHZ1Q6ZSZ6 1077 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 STRA8Q7Z7C7 330 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 SLFN11Q7Z7L1 901 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF554Q86TJ5 538 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 EPS8L1Q8TE68 723 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF518BQ9C0D4 1074 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 VPS33BQ9H267 617 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CAAP1Q9H8G2 361 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 LATS2Q9NRM7 1088 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 MAP3K20Q9NYL2 800 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 TMCO1Q9UM00 188 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CES2O00748 559 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 GLRA3O75311 464 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 LSM8O95777 96 aaKnown RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 TFE3P19532 575 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 PCSK1P29120 753 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 GJA8P48165 433 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 PLOD1Q02809 727 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 DGKZQ13574 1117 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 PDK2Q15119 407 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ATP13A4Q4VNC1 1196 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 RNF43Q68DV7 783 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 FAM117BQ6P1L5 589 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 POTEAQ6S8J7 498 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 DEFB132Q7Z7B7 95 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 C4orf32Q8N8J7 132 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 TNFRSF25Q93038 417 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 CATSPERBQ9H7T0 1116 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 DNAAF2Q9NVR5 837 aaKnown RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 UBAP1Q9NZ09 502 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 SCHIP1Q9P0W5 487 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 APPL1Q9UKG1 709 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 TIMM13Q9Y5L4 95 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-202ENST00000343090 MEI4A8MW99 385 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 KBTBD13C9JR72 458 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 AP3B1O00203 1094 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 MT-CO1P00395 513 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 RGS2P41220 211 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 NDST1P52848 882 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 ATP1A4Q13733 1029 aa8.31□□□□□ -1.08
UBE4B-202ENST00000343090 C10orf120Q5SQS8 335 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms