RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 GSDMBQ8TAX9 411 aa9.78□□□□□ -0.84
TRERF1-201ENST00000340840 CCDC28BQ9BUN5 200 aa9.78□□□□□ -0.84
TRERF1-201ENST00000340840 NDUFA13Q9P0J0 144 aa9.78□□□□□ -0.84
TRERF1-201ENST00000340840 C2orf71A6NGG8 1288 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 KPNA7A9QM74 516 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 TM7SF2O76062 418 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 PTPN11Q06124 597 aaPredicted RBP9.77□□□□□ -0.85
TRERF1-201ENST00000340840 PTPN20Q4JDL3 420 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 SESTD1Q86VW0 696 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 STKLD1Q8NE28 680 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 JOSD2Q8TAC2 188 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 SERAC1Q96JX3 654 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 WRNIP1Q96S55 665 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 MIPEPQ99797 713 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 ECSITQ9BQ95 431 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 PLLPQ9Y342 182 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 ATAD5Q96QE3 1844 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 NFASCO94856 1347 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 KIF13BQ9NQT8 1826 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 GRAP2O75791 330 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 IL18RAPO95256 599 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 GM2AP17900 193 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 GCAP28676 217 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 MSS51Q4VC12 460 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 NXNQ6DKJ4 435 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 RAB3IL1Q8TBN0 382 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 PRPF31Q8WWY3 499 aaKnown RBP9.77□□□□□ -0.85
TRERF1-201ENST00000340840 RXFP2Q8WXD0 754 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 OTUD5Q96G74 571 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 DHX35Q9H5Z1 703 aaKnown RBP9.77□□□□□ -0.85
TRERF1-201ENST00000340840 FARP1Q9Y4F1 1045 aaPredicted RBP9.77□□□□□ -0.85
TRERF1-201ENST00000340840 VWA5AO00534 786 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 GRK2P25098 689 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 FASTKD1Q53R41 847 aaKnown RBP9.77□□□□□ -0.85
TRERF1-201ENST00000340840 ZBTB41Q5SVQ8 909 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 RARS2Q5T160 578 aaKnown RBP9.77□□□□□ -0.85
TRERF1-201ENST00000340840 ARCQ7LC44 396 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 CCNYQ8ND76 341 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 MECRQ9BV79 373 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 KLHL4Q9C0H6 718 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 POLIQ9UNA4 740 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 ZNF536O15090 1300 aa9.77□□□□□ -0.85
TRERF1-201ENST00000340840 LOC100653049A0A140TA62 436 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 PIK3R2O00459 728 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 KRT34O76011 436 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 SERPINA6P08185 405 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 SESN2P58004 480 aaPredicted RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 TNFAIP2Q03169 654 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 GAD2Q05329 585 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 WASHC5Q12768 1159 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 ORC1Q13415 861 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 MAP7D1Q3KQU3 841 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 ATF7IP2Q5U623 682 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 KYAT3Q6YP21 454 aaKnown RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 PDZD4Q76G19 769 aaPredicted RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 GPC2Q8N158 579 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 UBA3Q8TBC4 463 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 PTPRN2Q92932 1015 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 SKA1Q96BD8 255 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 GPAMQ9HCL2 828 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 HOXC10Q9NYD6 342 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 ARHGAP26Q9UNA1 814 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 WASF2Q9Y6W5 498 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 BIRC5O15392 142 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 MAP3K6O95382 1288 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 VDRP11473 427 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 TGM2P21980 687 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 RPL10AP62906 217 aaKnown RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 OGDHQ02218 1023 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 DEUP1Q05D60 604 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 IFRD2Q12894 506 aaPredicted RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 NOMO1Q15155 1222 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 STILQ15468 1287 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 DEFB115Q30KQ5 88 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 AAGABQ6PD74 315 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 PIWIL2Q8TC59 973 aaKnown RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 WDR60Q8WVS4 1066 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 SEPT1Q8WYJ6 367 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 HIC2Q96JB3 615 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 ZNF668Q96K58 619 aaPredicted RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 ZNF180Q9UJW8 692 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 CDY2AQ9Y6F7 541 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 CDY1Q9Y6F8 540 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 COL5A3P25940 1745 aaPredicted RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 E7ESA3 106 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 KLF11O14901 512 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 TOMM70O94826 608 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 TRUB2O95900 331 aaKnown RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 CST3P01034 146 aaPredicted RBP9.76□□□□□ -0.85
TRERF1-201ENST00000340840 LYNP07948 512 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 GSTT1P30711 240 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 RAP1GAPP47736 663 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 RGS7P49802 495 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 HMGCS2P54868 508 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 SLC18A2Q05940 514 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 LAMB3Q13751 1172 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 PPP2R5DQ14738 602 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 CNGA3Q16281 694 aa9.76□□□□□ -0.85
TRERF1-201ENST00000340840 MPZL3Q6UWV2 235 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms