RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 GTF2IRD1Q9UHL9 959 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 A0A0G2JMZ2 1700 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 GBP2P32456 591 aaPredicted RBP10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 DEUP1Q05D60 604 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 ENPEPQ07075 957 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 SPARCL1Q14515 664 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 TCEAL1Q15170 157 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 FNBP1LQ5T0N5 605 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 C3orf62Q6ZUJ4 267 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 TP53INP2Q8IXH6 220 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 MYCBPAPQ8TBZ2 947 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 APOL2Q9BQE5 337 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 PLEKHA5Q9HAU0 1116 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 IL1RAPL1Q9NZN1 696 aa10.59□□□□□ -0.71
RBFOX1-202ENST00000340209 MBLAC1A4D2B0 266 aaPredicted RBP10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 CA12O43570 354 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 MGEA5O60502 916 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 USP12O75317 370 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 TMEM63AO94886 807 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 ITGB1P05556 798 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 IVDP26440 423 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 HDAC4P56524 1084 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 INCA1Q0VD86 236 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 TFDP2Q14188 446 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 MSS51Q4VC12 460 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 NUGGCQ68CJ6 796 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 ARHGEF18Q6ZSZ5 1173 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 IFNLR1Q8IU57 520 aaPredicted RBP10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 FUKQ8N0W3 1084 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 OTUD6BQ8N6M0 293 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 PPM1NQ8N819 430 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 CELF6Q96J87 481 aaKnown RBP10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 PCDH18Q9HCL0 1135 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 UBP1Q9NZI7 540 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 CNTN3Q9P232 1028 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 FAM169AQ9Y6X4 670 aa10.58□□□□□ -0.71
RBFOX1-202ENST00000340209 TCRBV5S1A1TA0A578 114 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 GABBR2O75899 941 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 HMBSP08397 361 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 CA4P22748 312 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 CACNA2D1P54289 1103 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 ARL4CP56559 192 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 SP3Q02447 781 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 GPRIN1Q7Z2K8 1008 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 ANKRD52Q8NB46 1076 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 SEC14L1Q92503 715 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 GMNCA6NCL1 334 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 TCP11X1B4DZS4 312 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 OLIG2Q13516 323 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 CES3Q6UWW8 571 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 BBS12Q6ZW61 710 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 TRMT10CQ7L0Y3 403 aaKnown RBP10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 LRRC52Q8N7C0 313 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 BBOF1Q8ND07 529 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 PCDH19Q8TAB3 1148 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 PCED1BQ96HM7 432 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 GLT1D1Q96MS3 346 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 FAM193BQ96PV7 902 aaPredicted RBP10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 EPN3Q9H201 632 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 SOAT2O75908 522 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 NEBLO76041 1014 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 CDH5P33151 784 aaPredicted RBP10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 GRIK1P39086 918 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 CDC42EP1Q00587 391 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 ITGA7Q13683 1181 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 PKN2Q16513 984 aaKnown RBP10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 TIGD5Q53EQ6 642 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 ANKRD20A8PQ5CZ79 823 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 EXOC3L1Q86VI1 746 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 HOMEZQ8IX15 550 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 LRRC34Q8IZ02 419 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 SH3TC2Q8TF17 1288 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 SLC35F5Q8WV83 523 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 XPO6Q96QU8 1125 aaKnown RBP10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 STMN4Q9H169 189 aaPredicted RBP10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 FGFR1OP2Q9NVK5 253 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 TTC3P53804 2025 aa10.58□□□□□ -0.72
RBFOX1-202ENST00000340209 YJEFN3A6XGL0 299 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 E7ENQ6 273 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 APOC4-APOC2K7ER74 178 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 NRP1O14786 923 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 SCAMP3O14828 347 aaKnown RBP10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 SEPT4O43236 478 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 APOC2P02655 101 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 NPR3P17342 541 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 ELK3P41970 407 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 DRG2P55039 364 aaKnown RBP10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 SNX16P57768 344 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 AGBL2Q5U5Z8 902 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 HEATR6Q6AI08 1181 aaKnown RBP10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 KCNT2Q6UVM3 1135 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 AGMOQ6ZNB7 445 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 ABI1Q8IZP0 508 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 MSL3Q8N5Y2 521 aaKnown RBP10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 FBF1Q8TES7 1133 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 CPT1BQ92523 772 aa10.57□□□□□ -0.72
RBFOX1-202ENST00000340209 CAPNS2Q96L46 248 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms