RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 KRT80Q6KB66 452 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 NSMFQ6X4W1 530 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 SLC30A10Q6XR72 485 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 EEPD1Q7L9B9 569 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 ANKRD13BQ86YJ7 626 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 SLC13A5Q86YT5 568 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 LEMD2Q8NC56 503 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 TOR1AIP2Q8NFQ8 470 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 ADAMTS16Q8TE57 1224 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 PKP2Q99959 881 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 HIPK3Q9H422 1215 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 POLHQ9Y253 713 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 CCDC88AQ3V6T2 1871 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 hCG_2039718K7EN88 272 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 RAB15P59190 212 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 TFAP4Q01664 338 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 ALCAMQ13740 583 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 DLGAP5Q15398 846 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 NPTX1Q15818 432 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 USP41Q3LFD5 358 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 C6orf132Q5T0Z8 1188 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 RARS2Q5T160 578 aaKnown RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 IFIT1BQ5T764 474 aaKnown RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 IZUMO3Q5VZ72 239 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 SCARA3Q6AZY7 606 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 SDE2Q6IQ49 451 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 PIWIL3Q7Z3Z3 882 aaKnown RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 CYP2U1Q7Z449 544 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 LSM14AQ8ND56 463 aaKnown RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 SCFD1Q8WVM8 642 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 KBTBD7Q8WVZ9 684 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 GIMAP1Q8WWP7 306 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 SLC5A5Q92911 643 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 TSG101Q99816 390 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 ZSWIM1Q9BR11 485 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 ZNF717Q9BY31 904 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 GCOM2Q9BZD3 368 aaPredicted RBP9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 CXorf21Q9HAI6 301 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 ANKMY1Q9P2S6 941 aa9.99□□□□□ -0.81
PTCHD4-201ENST00000339488 ARHGEF37A1IGU5 675 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 MINDY4BA8MYZ0 360 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 UBAP1LF5GYI3 381 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 TCEA3O75764 348 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 H6PDO95479 791 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 DBTP11182 482 aaKnown RBP9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 ARNTP27540 789 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 POLR2BP30876 1174 aaKnown RBP9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 S100A5P33763 92 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 ACOT2P49753 483 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 ZNF132P52740 706 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 PMS2P3Q13401 168 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 NEDD8Q15843 81 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 C10orf76Q5T2E6 689 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 ZCCHC23Q6ZST2 131 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 IFNL3Q8IZI9 196 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 FIBCD1Q8N539 461 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 ABTB2Q8N961 1025 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 CERKQ8TCT0 537 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 RMND5BQ96G75 393 aaPredicted RBP9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 VMP1Q96GC9 406 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 VCPIP1Q96JH7 1222 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 DHRS9Q9BPW9 319 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 C7orf25Q9BPX7 421 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 TMEM79Q9BSE2 394 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 CCDC106Q9BWC9 280 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 HEMGNQ9BXL5 484 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 ADPRHL2Q9NX46 363 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 WHRNQ9P202 907 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 CDH1P12830 882 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 NAGAP17050 411 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 PTGS2P35354 604 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 ADD2P35612 726 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 GJC1P36383 396 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 PRKD1Q15139 912 aaPredicted RBP9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 VPS72Q15906 364 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 MOGQ16653 247 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 ABCB5Q2M3G0 1257 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 LRIT3Q3SXY7 679 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 ZNF786Q8N393 782 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 CADM2Q8N3J6 435 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 NAT16Q8N8M0 369 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 OLIG1Q8TAK6 271 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 CABLES1Q8TDN4 633 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 SNX19Q92543 992 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 TP53INP1Q96A56 240 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 DACT3Q96B18 629 aaPredicted RBP9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 PGBD4Q96DM1 585 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 SGF29Q96ES7 293 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 OLFM1Q99784 485 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 MIR1-1HGQ9H1L0 117 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 ATP13A3Q9H7F0 1226 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 C10orf88Q9H8K7 445 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 SCUBE2Q9NQ36 999 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 GDAP2Q9NXN4 497 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 ZNF229Q9UJW7 825 aa9.98□□□□□ -0.81
PTCHD4-201ENST00000339488 H3BNH8 94 aa9.97□□□□□ -0.81
PTCHD4-201ENST00000339488 ERVH48-1M5A8F1 160 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms