RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 EGFP01133 1207 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 IGLV1-40P01703 118 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 MCF2P10911 925 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 MUTP22033 750 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 DDX6P26196 483 aaKnown RBP eCLIP10.04□□□□□ -0.83e-8■□□□□ 10.6
UBE2D3-202ENST00000338145 TUFMP49411 452 aaKnown RBP10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 GALK1P51570 392 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 DGKEP52429 567 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 IRX4P78413 519 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 HNRNPDQ14103 355 aaKnown RBP10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 DMC1Q14565 340 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 VEPH1Q14D04 833 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 UAP1L1Q3KQV9 507 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 ZNF568Q3ZCX4 644 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 CC2D1AQ6P1N0 951 aaPredicted RBP10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 RPLP0P6Q8NHW5 317 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 FBLIM1Q8WUP2 373 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 WASF1Q92558 559 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 MRRFQ96E11 262 aaKnown RBP10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 PGLYRP2Q96PD5 576 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 MTMR9Q96QG7 549 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 ACO2Q99798 780 aaKnown RBP10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 P2RY13Q9BPV8 354 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 POLR3CQ9BUI4 534 aaPredicted RBP10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 MRPL4Q9BYD3 311 aaKnown RBP10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 CDT1Q9H211 546 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 SEMA6CQ9H3T2 930 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 KIF9Q9HAQ2 790 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 ANKRD11Q6UB99 2663 aaPredicted RBP10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 STK36Q9NRP7 1315 aa10.04□□□□□ -0.8
UBE2D3-202ENST00000338145 DMXL2Q8TDJ6 3036 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 A0A087WWV3 80 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 MEFVO15553 781 aaPredicted RBP10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 PRAMEF12O95522 483 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 PAX3P23760 479 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 KRT2P35908 639 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 AVPR1AP37288 418 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 OSTNP61366 133 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 BFSP1Q12934 665 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 TOB2Q14106 344 aaPredicted RBP10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 PDGFRLQ15198 375 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 ANKRD1Q15327 319 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 CPSF6Q16630 551 aaKnown RBP eCLIP10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 TSNAXIP1Q2TAA8 658 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 SOWAHCQ53LP3 525 aaPredicted RBP10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 KIAA1211LQ6NV74 962 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 ARMCX5Q6P1M9 558 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 HDXQ7Z353 690 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 CMTM8Q8IZV2 173 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 TSTD1Q8NFU3 115 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 ERMNQ8TAM6 284 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 NUP210Q8TEM1 1887 aaPredicted RBP10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 TCHPQ9BT92 498 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 EBF3Q9H4W6 596 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 UPF2Q9HAU5 1272 aaKnown RBP10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 HPS4Q9NQG7 708 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 KLK13Q9UKR3 277 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 ZFYVE26Q68DK2 2539 aa10.03□□□□□ -0.8
UBE2D3-202ENST00000338145 HMX2A2RU54 273 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 MTMR11A4FU01 709 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 EIF4E1BA6NMX2 242 aaKnown RBP10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 VNN2O95498 520 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 TYMPP19971 482 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 CYP3A5P20815 502 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 PROZP22891 400 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 RPA1P27694 616 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 LRPAP1P30533 357 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 AARSP49588 968 aaKnown RBP eCLIP10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 SIM1P81133 766 aaPredicted RBP10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 SMARCB1Q12824 385 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 TAF12Q16514 161 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 TRIM61Q5EBN2 209 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 EARS2Q5JPH6 523 aaKnown RBP10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 SPDYCQ5MJ68 293 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 LMBRD2Q68DH5 695 aaPredicted RBP10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 MPZL3Q6UWV2 235 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 RASSF3Q86WH2 238 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 SMYD4Q8IYR2 804 aaPredicted RBP10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 CPA6Q8N4T0 437 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 ATAD1Q8NBU5 361 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 KCT2Q8NC54 265 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 CD101Q93033 1021 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 C18orf25Q96B23 403 aaPredicted RBP10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 ELMO3Q96BJ8 720 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 CNOT6LQ96LI5 555 aaKnown RBP10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 TSPAN18Q96SJ8 248 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 KIFC3Q9BVG8 833 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 SLC46A2Q9BY10 475 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 PLEKHA5Q9HAU0 1116 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 PDRG1Q9NUG6 133 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 TDP1Q9NUW8 608 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 KCNG1Q9UIX4 513 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 TBX20Q9UMR3 447 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 PCDHB5Q9Y5E4 795 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 EML5Q05BV3 1969 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 TRIP11Q15643 1979 aa10.02□□□□□ -0.81
UBE2D3-202ENST00000338145 IGF2RP11717 2491 aa10.01□□□□□ -0.81
UBE2D3-202ENST00000338145 CCDC169A6NNP5 214 aa10.01□□□□□ -0.81
UBE2D3-202ENST00000338145 PATE3B3GLJ2 98 aa10.01□□□□□ -0.81
UBE2D3-202ENST00000338145 SCAMP3O14828 347 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms