RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 GMEB2Q9UKD1 530 aa11.83□□□□□ -0.52
C9orf85-201ENST00000334731 SH3BP1Q9Y3L3 701 aa11.83□□□□□ -0.52
C9orf85-201ENST00000334731 USP3Q9Y6I4 520 aa11.83□□□□□ -0.52
C9orf85-201ENST00000334731 GREB1Q4ZG55 1949 aa11.83□□□□□ -0.52
C9orf85-201ENST00000334731 A0A1W2PQH9 124 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 GREM1O60565 184 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 ADH1CP00326 375 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 RETP07949 1114 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 ADH5P11766 374 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 RARGP13631 454 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 ATP5C1P36542 298 aaKnown RBP11.82□□□□□ -0.52
C9orf85-201ENST00000334731 EIF2DP41214 584 aaKnown RBP11.82□□□□□ -0.52
C9orf85-201ENST00000334731 PPP1R2P41236 205 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 CUL2Q13617 745 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 MORC3Q14149 939 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 C2orf27AQ580R0 203 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 LY6G5CQ5SRR4 150 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 ARHGAP17Q68EM7 881 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 TTI2Q6NXR4 508 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 HTR3DQ70Z44 454 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 CCDC186Q7Z3E2 898 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 SCD5Q86SK9 330 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 C12orf40Q86WS4 652 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 SFTPA1Q8IWL2 248 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 BBS7Q8IWZ6 715 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 ZNF276Q8N554 614 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 CCDC26Q8TAB7 109 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 CEP63Q96MT8 703 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 HHIPQ96QV1 700 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 PNKPQ96T60 521 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 UBXN6Q9BZV1 441 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 PARD6AQ9NPB6 346 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.82□□□□□ -0.52
C9orf85-201ENST00000334731 ANAPC1Q9H1A4 1944 aa11.82□□□□□ -0.52
C9orf85-201ENST00000334731 PMM2O15305 246 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 KAT7O95251 611 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 IRF1P10914 325 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 FMO5P49326 533 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 GAD2Q05329 585 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 SPEM2Q0P670 501 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 LRMPQ12912 555 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 DMC1Q14565 340 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 KLHL10Q6JEL2 608 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 KLHDC10Q6PID8 442 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 FOXR2Q6PJQ5 311 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 CEP68Q76N32 757 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 TMEM25Q86YD3 366 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 ANKRD52Q8NB46 1076 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 PTCD2Q8WV60 388 aaKnown RBP11.81□□□□□ -0.52
C9orf85-201ENST00000334731 GAB3Q8WWW8 586 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 NELFBQ8WX92 580 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 ACDQ96AP0 544 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 SPHK2Q9NRA0 654 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 EBF1Q9UH73 591 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 DNMT3LQ9UJW3 386 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 NUDT5Q9UKK9 219 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 LHX6Q9UPM6 363 aa11.81□□□□□ -0.52
C9orf85-201ENST00000334731 BIN1O00499 593 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 MDM4O15151 490 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 AXIN1O15169 862 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 RPP40O75818 363 aaKnown RBP11.8□□□□□ -0.52
C9orf85-201ENST00000334731 APBB3O95704 486 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 APODP05090 189 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 GRIA2P42262 883 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 PLA2G4AP47712 749 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 SEC13P55735 322 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 MRPS21P82921 87 aaKnown RBP11.8□□□□□ -0.52
C9orf85-201ENST00000334731 RSPO4Q2I0M5 234 aaPredicted RBP11.8□□□□□ -0.52
C9orf85-201ENST00000334731 RAB41Q5JT25 222 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 C10orf120Q5SQS8 335 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 EMC10Q5UCC4 262 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 CACNA2D4Q7Z3S7 1137 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.8□□□□□ -0.52
C9orf85-201ENST00000334731 PIGZQ86VD9 579 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 TTC30AQ86WT1 665 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 ETFBKMTQ8IXQ9 262 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 PHTF2Q8N3S3 785 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 CCDC33Q8N5R6 958 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 FAM160A2Q8N612 972 aaPredicted RBP11.8□□□□□ -0.52
C9orf85-201ENST00000334731 UBR7Q8N806 425 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 NAT16Q8N8M0 369 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 DLL3Q9NYJ7 618 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 CLIC5Q9NZA1 410 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 NAGPAQ9UK23 515 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 USP18Q9UMW8 372 aa11.8□□□□□ -0.52
C9orf85-201ENST00000334731 PRR5-ARHGAP8B1AHC4 643 aa11.79□□□□□ -0.52
C9orf85-201ENST00000334731 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.79□□□□□ -0.52
C9orf85-201ENST00000334731 TULP2O00295 520 aa11.79□□□□□ -0.52
C9orf85-201ENST00000334731 HOXC11O43248 304 aaPredicted RBP11.79□□□□□ -0.52
C9orf85-201ENST00000334731 LRP3O75074 770 aa11.79□□□□□ -0.52
C9orf85-201ENST00000334731 TULP3O75386 442 aa11.79□□□□□ -0.52
C9orf85-201ENST00000334731 RALAP11233 206 aa11.79□□□□□ -0.52
C9orf85-201ENST00000334731 TBXAS1P24557 533 aaPredicted RBP11.79□□□□□ -0.52
C9orf85-201ENST00000334731 TNFRSF4P43489 277 aa11.79□□□□□ -0.52
C9orf85-201ENST00000334731 KIR2DL1P43626 348 aaPredicted RBP11.79□□□□□ -0.52
C9orf85-201ENST00000334731 STX17P56962 302 aa11.79□□□□□ -0.52
C9orf85-201ENST00000334731 YWHAEP62258 255 aaKnown RBP11.79□□□□□ -0.52
C9orf85-201ENST00000334731 ARHGAP8P85298 464 aa11.79□□□□□ -0.52
C9orf85-201ENST00000334731 LMNB2Q03252 620 aa11.79□□□□□ -0.52
C9orf85-201ENST00000334731 DSG2Q14126 1118 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms