RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 ABCB6Q9NP58 842 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 MYOZ2Q9NPC6 264 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 XPO7Q9UIA9 1087 aaKnown RBP13.05□□□□□ -0.32
KPNA4-201ENST00000334256 PITPNM2Q9BZ72 1349 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 ESYT3A0FGR9 886 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 BHMG1C9JSJ3 638 aaPredicted RBP13.05□□□□□ -0.32
KPNA4-201ENST00000334256 CPNE6O95741 557 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 ZDHHC20Q5W0Z9 365 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
KPNA4-201ENST00000334256 ECSITQ9BQ95 431 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 ZNF536O15090 1300 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 TNFRSF21O75509 655 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 SOX6P35712 828 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 RHOAP61586 193 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 RAPSNQ13702 412 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 MINDY4Q4G0A6 757 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 FIBCD1Q8N539 461 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 MAP3K6O95382 1288 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 ERCC2P18074 760 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 CBX5P45973 191 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 SKP1P63208 163 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 PEG10Q86TG7 708 aaKnown RBP13.05□□□□□ -0.32
KPNA4-201ENST00000334256 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
KPNA4-201ENST00000334256 CLDND1Q9NY35 253 aa13.05□□□□□ -0.32
KPNA4-201ENST00000334256 SMCO3A2RU48 225 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 ISM1B1AKI9 464 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 QARSP47897 775 aaKnown RBP13.04□□□□□ -0.32
KPNA4-201ENST00000334256 LRRC69Q6ZNQ3 347 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 TPD52L3Q96J77 140 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 KLHL32Q96NJ5 620 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 MED15Q96RN5 788 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 LYVE1Q9Y5Y7 322 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 CSTF2P33240 577 aaKnown RBP eCLIP13.04□□□□□ -0.32
KPNA4-201ENST00000334256 GOLGA7BQ2TAP0 167 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 SPATA21Q7Z572 469 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 KCNB2Q92953 911 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 LRRC4BQ9NT99 713 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 NESP48681 1621 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 A6NCN8 305 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 PSMD9O00233 223 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 GLP2RO95838 553 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 HSPA13P48723 471 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 NDUFA5Q16718 116 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 PLA2G4EQ3MJ16 856 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 KCNV1Q6PIU1 500 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 KIF2BQ8N4N8 673 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 TNIP2Q8NFZ5 429 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 KIAA0232Q92628 1395 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 SRP72O76094 671 aaKnown RBP13.04□□□□□ -0.32
KPNA4-201ENST00000334256 OLFM3Q96PB7 478 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 NCK2O43639 380 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 EIF3EP60228 445 aaKnown RBP13.04□□□□□ -0.32
KPNA4-201ENST00000334256 LPAL2Q16609 132 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 SLC9A6Q92581 669 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 USP19O94966 1318 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 CLEC3AO75596 197 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 AKR1B1P15121 316 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 RRM2P31350 389 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 ZNF248Q8NDW4 579 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 CHST13Q8NET6 341 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 ZNF563Q8TA94 476 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 FAM172AQ8WUF8 416 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 C1orf54Q8WWF1 131 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 C19orf60Q96EN9 201 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 DIS3Q9Y2L1 958 aaKnown RBP13.04□□□□□ -0.32
KPNA4-201ENST00000334256 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 IGF1RP08069 1367 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 RHPN2P1A8MT19 583 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 HOXA2O43364 376 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 PGM3O95394 542 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 BPNT1O95861 308 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 LYNP07948 512 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 WEE2P0C1S8 567 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 ALPPL2P10696 532 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 TFAP2DQ7Z6R9 452 aa13.04□□□□□ -0.32
KPNA4-201ENST00000334256 SERPINA3P01011 423 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 DSG1Q02413 1049 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 CBWD3Q5JTY5 395 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 CBWD5Q5RIA9 395 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 IZUMO3Q5VZ72 239 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 DEFB129Q9H1M3 183 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 ACO1P21399 889 aaKnown RBP13.03□□□□□ -0.32
KPNA4-201ENST00000334256 AP1S2P56377 157 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 OCLNQ16625 522 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 STRIP1Q5VSL9 837 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 TMPRSS9Q7Z410 1059 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 DAW1Q8N136 415 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 MRPL48Q96GC5 212 aaKnown RBP13.03□□□□□ -0.32
KPNA4-201ENST00000334256 PARD6BQ9BYG5 372 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 VAMP7P51809 220 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 CDYL2Q8N8U2 506 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 SLC44A5Q8NCS7 719 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 CPT1CQ8TCG5 803 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 PRCCQ92733 491 aaPredicted RBP13.03□□□□□ -0.32
KPNA4-201ENST00000334256 DPEP2Q9H4A9 486 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 RNF19AQ9NV58 838 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 KLHL28Q9NXS3 571 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 MYH10P35580 1976 aa13.03□□□□□ -0.32
KPNA4-201ENST00000334256 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
KPNA4-201ENST00000334256 SNAP23O00161 211 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms