RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 DDX3XO00571 662 aaKnown RBP eCLIP14.13□□□□□ -0.155e-15■■■■□ 24.8
TUBB2A-201ENST00000333628 CCL16O15467 120 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 PAPLNO95428 1278 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 BDNFP23560 247 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 HOXA9P31269 272 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 ALDH1A3P47895 512 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 SLC20A2Q08357 652 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 TWF1Q12792 350 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 ATAT1Q5SQI0 421 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 TMEM270Q6UE05 265 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 CYFIP2Q96F07 1278 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 RIPOR3Q96MK2 946 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 KRT12Q99456 494 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 SEPT5Q99719 369 aaPredicted RBP14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 SYT11Q9BT88 431 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 CAPS2Q9BXY5 557 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 AMFRQ9UKV5 643 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 CNTN6Q9UQ52 1028 aa14.13□□□□□ -0.15
TUBB2A-201ENST00000333628 LRG1P02750 347 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 MTHFRP42898 656 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 MAGEA11P43364 429 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 MTMR3Q13615 1198 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 DDR2Q16832 855 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 SRLQ86TD4 932 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 NT5DC3Q86UY8 548 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 RHOT2Q8IXI1 618 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 FUKQ8N0W3 1084 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 SLC2A14Q8TDB8 520 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 CTNNBL1Q8WYA6 563 aaPredicted RBP14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 SEC14L1Q92503 715 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 SMG7Q92540 1137 aaKnown RBP14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 MED10Q9BTT4 135 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 ZNF518BQ9C0D4 1074 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 PIDD1Q9HB75 910 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 FAM49BQ9NUQ9 324 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 YIPF1Q9Y548 306 aa14.12□□□□□ -0.15
TUBB2A-201ENST00000333628 ANKRD62A6NC57 917 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 HMGB1P1B2RPK0 211 aaPredicted RBP14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 LOC730098B7Z3J9 87 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 FOXN3O00409 490 aaPredicted RBP14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 CEP104O60308 925 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 XYLBO75191 536 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 KRT5P13647 590 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 CCDC130P13994 396 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 ATF6P18850 670 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 PLA2G5P39877 138 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 CARSP49589 748 aaKnown RBP14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 GPR15P49685 360 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 EPHB3P54753 998 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 DRAP1Q14919 205 aaPredicted RBP14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 DNAJC21Q5F1R6 531 aaKnown RBP14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 VSTM1Q6UX27 236 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 SPATS2Q86XZ4 545 aaKnown RBP14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 SCN4BQ8IWT1 228 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 RBBP8NLQ8NC74 664 aaPredicted RBP14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 GPR152Q8TDT2 470 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 SHC3Q92529 594 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 GDAP1L1Q96MZ0 367 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 NECTIN4Q96NY8 510 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 HNRNPABQ99729 332 aaKnown RBP14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 CARD9Q9H257 536 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 EHD2Q9NZN4 543 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 KIAA1257Q9ULG3 409 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 NFU1Q9UMS0 254 aa14.11□□□□□ -0.15
TUBB2A-201ENST00000333628 RAD51CO43502 376 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 CALCAP01258 141 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 POU2F2P09086 479 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 PAEPP09466 180 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 VDRP11473 427 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 GRIK1P39086 918 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 USP8P40818 1118 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 IRAK1P51617 712 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 ZNF132P52740 706 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 CACNA2D1P54289 1103 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 GALCP54803 685 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 RPL10AP62906 217 aaKnown RBP14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 PLD1Q13393 1074 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 PPP1R26Q5T8A7 1209 aaPredicted RBP14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 SDHAF4Q5VUM1 108 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 KDM7AQ6ZMT4 941 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 FAM35AQ86V20 835 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 ARFGAP2Q8N6H7 521 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 TSEN2Q8NCE0 465 aaKnown RBP14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 GIPC2Q8TF65 315 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 CASKIN2Q8WXE0 1202 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 ZNF512Q96ME7 567 aaPredicted RBP14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 ZIM3Q96PE6 472 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 KCNK16Q96T55 309 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 GPR88Q9GZN0 384 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 FAM114A2Q9NRY5 505 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 TMEM30AQ9NV96 361 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 HCFC1R1Q9NWW0 138 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 SMARCAL1Q9NZC9 954 aa14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 DNMT3BQ9UBC3 853 aaKnown RBP14.1□□□□□ -0.15
TUBB2A-201ENST00000333628 GOLGA6L10A6NI86 522 aa14.09□□□□□ -0.15
TUBB2A-201ENST00000333628 MIF4GDA9UHW6 222 aaKnown RBP14.09□□□□□ -0.15
TUBB2A-201ENST00000333628 EIF3HO15372 352 aaKnown RBP eCLIP14.09□□□□□ -0.15
TUBB2A-201ENST00000333628 SART1O43290 800 aaKnown RBP14.09□□□□□ -0.15
TUBB2A-201ENST00000333628 CD19P15391 556 aa14.09□□□□□ -0.15
TUBB2A-201ENST00000333628 PTPN2P17706 415 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms