RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TPBGLP0DKB5 382 aa7.27□□□□□ -1.24
SMC1A-201ENST00000322213 FOSL1P15407 271 aa7.27□□□□□ -1.24
SMC1A-201ENST00000322213 CDK8P49336 464 aa7.27□□□□□ -1.24
SMC1A-201ENST00000322213 TBC1D25Q3MII6 688 aa7.27□□□□□ -1.24
SMC1A-201ENST00000322213 SCARA3Q6AZY7 606 aa7.27□□□□□ -1.24
SMC1A-201ENST00000322213 PLEKHM3Q6ZWE6 761 aa7.27□□□□□ -1.24
SMC1A-201ENST00000322213 C11orf74Q86VG3 221 aa7.27□□□□□ -1.24
SMC1A-201ENST00000322213 DIS3LQ8TF46 1054 aaKnown RBP7.27□□□□□ -1.24
SMC1A-201ENST00000322213 L3MBTL3Q96JM7 780 aaPredicted RBP7.27□□□□□ -1.24
SMC1A-201ENST00000322213 RBBP8Q99708 897 aa7.27□□□□□ -1.24
SMC1A-201ENST00000322213 PHF24Q9UPV7 400 aa7.27□□□□□ -1.24
SMC1A-201ENST00000322213 PCDHB2Q9Y5E7 798 aa7.27□□□□□ -1.24
SMC1A-201ENST00000322213 ADGRA2Q96PE1 1338 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 USP17L5A8MUK1 530 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 GNPATO15228 680 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 FGFR3P22607 806 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 ME2P23368 584 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 IL12AP29459 219 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 KCNA1Q09470 495 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 TCP10Q12799 353 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 EXOC3L1Q86VI1 746 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 RNF135Q8IUD6 432 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 SHCBP1Q8NEM2 672 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 TOR1AIP2Q8NFQ8 470 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 DDX50Q9BQ39 737 aaKnown RBP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 USE1Q9NZ43 259 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 MAPRE3Q9UPY8 281 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 SFI1A8K8P3 1242 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 PSAPP07602 524 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 SDC4P31431 198 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 ANTXR2P58335 489 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 ARCQ7LC44 396 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 ZNF571Q7Z3V5 609 aaPredicted RBP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 CLNKQ7Z7G1 428 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 SLC26A11Q86WA9 606 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 ANKRD33BA6NCL7 494 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 TIMM44O43615 452 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 NAT1P18440 290 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 RABL6Q3YEC7 729 aaPredicted RBP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 EPHA10Q5JZY3 1008 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 SLFN13Q68D06 897 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 SETD9Q8NE22 299 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 CEP170P1Q96L14 293 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 WRNIP1Q96S55 665 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 TUBGCP4Q9UGJ1 667 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 LYNP07948 512 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 PTGS2P35354 604 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 AP3M2P53677 418 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 DYNLL1P63167 89 aaKnown RBP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 WASHC5Q12768 1159 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 WDR59Q6PJI9 974 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 IKBIPQ70UQ0 350 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 BBS5Q8N3I7 341 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 SRPK1Q96SB4 655 aaKnown RBP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 LNPEPQ9UIQ6 1025 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 ANKRD6Q9Y2G4 727 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 DUOX1Q9NRD9 1551 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 FAM205CA6NFA0 338 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 TOMM70O94826 608 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 IFNA8P32881 189 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 CHRNB3Q05901 458 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 TAF12Q16514 161 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 CCNG2Q16589 344 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 FAM83EQ2M2I3 478 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 PIGWQ7Z7B1 504 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 ARHGEF19Q8IW93 802 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 MTG1Q9BT17 334 aaPredicted RBP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 VPS45Q9NRW7 570 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 PEX1O43933 1283 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 ABL2P42684 1182 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 RAD23AP54725 363 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 PEX3P56589 373 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 UBE3AQ05086 875 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 BNIP1Q12981 228 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 TSNQ15631 228 aaKnown RBP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 CCDC149Q6ZUS6 474 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 GPD1LQ8N335 351 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 TAMM41Q96BW9 452 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 EMC3Q9P0I2 261 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 K7ERI5 159 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 SERPINE1P05121 402 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 RPL26P61254 145 aaKnown RBP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 ST3GAL1Q11201 340 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 POLD3Q15054 466 aaPredicted RBP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 TYSND1Q2T9J0 566 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 C15orf59Q2T9L4 293 aaPredicted RBP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 FAM13CQ8NE31 585 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 SNX19Q92543 992 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 BTBD9Q96Q07 612 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 JMJD4Q9H9V9 463 aa7.27□□□□□ -1.25
SMC1A-201ENST00000322213 RPF1Q9H9Y2 349 aaKnown RBP7.27□□□□□ -1.25
SMC1A-201ENST00000322213 ATG2BQ96BY7 2078 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 PHLPP1O60346 1717 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 GOLGA8JA6NMD2 632 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 PRPF4O43172 522 aaKnown RBP eCLIP7.26□□□□□ -1.259e-8■■■■□ 26.3
SMC1A-201ENST00000322213 PRKAA2P54646 552 aa7.26□□□□□ -1.25
SMC1A-201ENST00000322213 AUHQ13825 339 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 C1DQ13901 141 aaKnown RBP7.26□□□□□ -1.25
SMC1A-201ENST00000322213 IVNS1ABPQ9Y6Y0 642 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms