RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 FAM153AQ9UHL3 310 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 RRN3P2A6NIE6 340 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 CNOT3O75175 753 aaKnown RBP13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 PDZK1Q5T2W1 519 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 CASP10Q92851 521 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 NARS2Q96I59 477 aaKnown RBP13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 PCDHGB3Q9Y5G1 929 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 ZNF839A8K0R7 811 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 DNALI1O14645 258 aaPredicted RBP13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 PPIL6Q8IXY8 311 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 CENPSQ8N2Z9 138 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 KCNN2Q9H2S1 579 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 VPS28Q9UK41 221 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 MSH4O15457 936 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 AKR1B1P15121 316 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 LBPP18428 481 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 PTPN3P26045 913 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 ATP2C1P98194 919 aaPredicted RBP13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 TRIQKQ629K1 86 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 FAM71DQ8N9W8 422 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 CNGB3Q9NQW8 809 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 CPDO75976 1380 aa13.26□□□□□ -0.29
SPTBN2-201ENST00000309996 LAMC1P11047 1609 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 ZNF682O95780 498 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 IFNA16P05015 189 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 MRPS35P82673 323 aaKnown RBP13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 DDI2Q5TDH0 399 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 UBA3Q8TBC4 463 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 TFE3P19532 575 aaPredicted RBP13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 SKIV2L2P42285 1042 aaKnown RBP13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 SCARF1Q14162 830 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 GAS2L1Q99501 681 aaPredicted RBP13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 ING3Q9NXR8 418 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 AHSPQ9NZD4 102 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 SMAPO00193 183 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 SCGNO76038 276 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 B3GAT3O94766 335 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 ATP6V1B2P21281 511 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 TARSP26639 723 aaKnown RBP13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 GTF2A2P52657 109 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 GALCP54803 685 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 XKR3Q5GH77 459 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 DGKKQ5KSL6 1271 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 ATF7IP2Q5U623 682 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 BRSK2Q8IWQ3 736 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 FAM9CQ8IZT9 166 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 MYO1HQ8N1T3 1032 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 DCP1AQ9NPI6 582 aaPredicted RBP13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 CPA2P48052 419 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 MRNIPQ6NTE8 343 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 RPRD1AQ96P16 312 aaPredicted RBP13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 FAM118BQ9BPY3 351 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 ROPN1BQ9BZX4 212 aaPredicted RBP13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 ROPN1Q9HAT0 212 aaPredicted RBP13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 COPG2Q9UBF2 871 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 IFNA14P01570 189 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 TRPC4APQ8TEL6 797 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 SNPHO15079 494 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 SUPT7LO94864 414 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 DENND1BQ6P3S1 775 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 DSG4Q86SJ6 1040 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 CRELD1Q96HD1 420 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 SHCBP1LQ9BZQ2 653 aa13.25□□□□□ -0.29
SPTBN2-201ENST00000309996 PABPC1P11940 636 aaKnown RBP13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 ITGA3P26006 1051 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 FDFT1P37268 417 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 ITGA8P53708 1063 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 MDM1Q8TC05 714 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 SERPINB12Q96P63 405 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 CACNA1FO60840 1977 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 A0A088AWK7 358 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 MYBL2P10244 700 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 ZNF10P21506 573 aaPredicted RBP13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 XRCC4Q13426 336 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 MTM1Q13496 603 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 ANGEL2Q5VTE6 544 aaKnown RBP13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 TMC5Q6UXY8 1006 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 HPDLQ96IR7 371 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 KLK14Q9P0G3 267 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 ADGRA3Q8IWK6 1321 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 MYMKA6NI61 221 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 AMHP03971 560 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 DOK6Q6PKX4 331 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 KLHL17Q6TDP4 642 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 FAM20CQ8IXL6 584 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 SNRNP27Q8WVK2 155 aaKnown RBP13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 PIGBQ92521 554 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 TPD52L2O43399 206 aaKnown RBP13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 SP100P23497 879 aaPredicted RBP13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 DDR2Q16832 855 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 COLEC12Q5KU26 742 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 PMF1Q6P1K2 205 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 ZNF655Q8N720 491 aaPredicted RBP13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 CDK5RAP1Q96SZ6 601 aaKnown RBP13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 TRIM43BA6NCK2 446 aa13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 IGF2BP3O00425 579 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPTBN2-201ENST00000309996 XYLBO75191 536 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms