RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 ANXA9O76027 345 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 RPL22P35268 128 aaKnown RBP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 PGM1P36871 562 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 ART3Q13508 389 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 MFSD10Q14728 455 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 PLEKHO2Q8TD55 490 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZNF516Q92618 1163 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 SIK2Q9H0K1 926 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 FZD8Q9H461 694 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 ACSS3Q9H6R3 686 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 LRRC40Q9H9A6 602 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 LGALS13Q9UHV8 139 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 SCOCQ9UIL1 159 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 MAP1BP46821 2468 aaKnown RBP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 THSD7AQ9UPZ6 1657 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 DFFAO00273 331 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 TXNDC9O14530 226 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 ATP9BO43861 1147 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 CST3P01034 146 aaPredicted RBP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 YWHAZP63104 245 aaKnown RBP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 DBN1Q16643 649 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 PTPN20Q4JDL3 420 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 C1orf146Q5VVC0 180 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 LCLAT1Q6UWP7 414 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZDHHC24Q6UX98 284 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZNF398Q8TD17 642 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZBED3Q96IU2 234 aaPredicted RBP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 TTC1Q99614 292 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 TINF2Q9BSI4 451 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 BATF3Q9NR55 127 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 CDY2AQ9Y6F7 541 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 CDY1Q9Y6F8 540 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 SLC15A5A6NIM6 579 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 F5H423 210 aaPredicted RBP11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 TULP2O00295 520 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 DIAPH2O60879 1101 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 LGR5O75473 907 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 CELF2O95319 508 aaKnown RBP11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZSCAN5DPP0CG00 497 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 SSTR1P30872 391 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 CHI3L2Q15782 390 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZBTB41Q5SVQ8 909 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 FAXCQ5TGI0 409 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 RNF43Q68DV7 783 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 DENND5BQ6ZUT9 1274 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 FAM183BPQ6ZVS7 135 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 ARHGAP18Q8N392 663 aa11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 SKA2Q8WVK7 121 aaPredicted RBP11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 TRIM56Q9BRZ2 755 aaKnown RBP11.27□□□□□ -0.6
PCDHGC4-201ENST00000306593 MYH4Q9Y623 1939 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 MAGEB16A2A368 324 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 KBTBD13C9JR72 458 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 TCEA3O75764 348 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 THP07101 528 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 HOXD10P28358 340 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 PTPN7P35236 360 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 GRIK1P39086 918 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 CDKN2BP42772 138 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 AMHR2Q16671 573 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 GNASQ5JWF2 1037 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 MROH9Q5TGP6 573 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 ARMC2Q8NEN0 867 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 HTR3CQ8WXA8 447 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 FAM161BQ96MY7 647 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 SIKE1Q9BRV8 207 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 EFHD1Q9BUP0 239 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 WDCPQ9H6R7 721 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 SP110Q9HB58 689 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 DDIT4Q9NX09 232 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 R3HDM2Q9Y2K5 976 aaKnown RBP11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 SLC2A3P11169 496 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 RAB27AP51159 221 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 ZNF157P51786 506 aaPredicted RBP11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 RAD23BP54727 409 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 MBTD1Q05BQ5 628 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 SLC45A4Q5BKX6 768 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 SH2D4BQ5SQS7 431 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 XYLT1Q86Y38 959 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 TMEM86AQ8N2M4 240 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 CALML6Q8TD86 181 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 CLUHO75153 1309 aa11.27□□□□□ -0.61
PCDHGC4-201ENST00000306593 ECM29Q5VYK3 1845 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 TIMM44O43615 452 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 MSCO60682 206 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 ARF4P18085 180 aaPredicted RBP11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 DNAJB2P25686 324 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 PMLP29590 882 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 FKBP1BP68106 108 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 XRCC4Q13426 336 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 SCUBE3Q8IX30 993 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 ANKRD52Q8NB46 1076 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 CD101Q93033 1021 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 HDAC11Q96DB2 347 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 IFT43Q96FT9 208 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 TSPAN17Q96FV3 270 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 AGAP3Q96P47 875 aa11.26□□□□□ -0.61
PCDHGC4-201ENST00000306593 FHDC1Q9C0D6 1143 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms