RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CYP4F11Q9HBI6 524 aa25.73■■□□□ 1.71
GTF2A1-201ENST00000298173 NGRNQ9NPE2 291 aaKnown RBP25.73■■□□□ 1.71
GTF2A1-201ENST00000298173 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 FSCN2O14926 492 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 YWHAQP27348 245 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 PBX2P40425 430 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 YWHAGP61981 247 aaKnown RBP eCLIP25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 PITX1P78337 314 aaPredicted RBP25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 IFRD2Q12894 506 aaPredicted RBP25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 AADACL2Q6P093 401 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 LRRN4CLQ8ND94 238 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 EXD1Q8NHP7 514 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 PGAP3Q96FM1 320 aaPredicted RBP25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 PEBP4Q96S96 227 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 TRIM62Q9BVG3 475 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 TLR9Q9NR96 1032 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 ABCC13Q9NSE7 274 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 RRN3Q9NYV6 651 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 SMARCAL1Q9NZC9 954 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 STAP1Q9ULZ2 295 aa25.72■■□□□ 1.71
GTF2A1-201ENST00000298173 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 C2orf71A6NGG8 1288 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 SLC38A8A6NNN8 435 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 CAPN9O14815 690 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 GRM6O15303 877 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 KRT7P08729 469 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 NCAM1P13591 858 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 DESP17661 470 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 PAFAH1B1P43034 410 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 CKAP4Q07065 602 aaKnown RBP25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 MTMR3Q13615 1198 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 GIPC2Q8TF65 315 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 GOLGA1Q92805 767 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 PBX4Q9BYU1 374 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 NMUR1Q9HB89 426 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 DDX56Q9NY93 547 aaKnown RBP25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 PCSK1NQ9UHG2 260 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 HIDE1A8MVS5 230 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 TGM5O43548 720 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 ZRANB2O95218 330 aaKnown RBP eCLIP25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 SMC1AQ14683 1233 aaKnown RBP25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 CMASQ8NFW8 434 aaPredicted RBP25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 EDEM1Q92611 657 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 ENTPD7Q9NQZ7 604 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 OSER1Q9NX31 292 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 MTUS1Q9ULD2 1270 aa25.71■■□□□ 1.71
GTF2A1-201ENST00000298173 RANBP2P49792 3224 aaKnown RBP25.7■■□□□ 1.7
GTF2A1-201ENST00000298173 RARAP10276 462 aa25.7■■□□□ 1.7
GTF2A1-201ENST00000298173 BMP8BP34820 402 aa25.7■■□□□ 1.7
GTF2A1-201ENST00000298173 SULT1E1P49888 294 aa25.7■■□□□ 1.7
GTF2A1-201ENST00000298173 ATXN1P54253 815 aaKnown RBP25.7■■□□□ 1.7
GTF2A1-201ENST00000298173 ITIH3Q06033 890 aa25.7■■□□□ 1.7
GTF2A1-201ENST00000298173 CCDC181Q5TID7 509 aa25.7■■□□□ 1.7
GTF2A1-201ENST00000298173 RCOR2Q8IZ40 523 aa25.7■■□□□ 1.7
GTF2A1-201ENST00000298173 EMILIN2Q9BXX0 1053 aa25.7■■□□□ 1.7
GTF2A1-201ENST00000298173 YIPF1Q9Y548 306 aa25.7■■□□□ 1.7
GTF2A1-201ENST00000298173 MTCL1Q9Y4B5 1905 aaKnown RBP25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 A0A1W2PQH9 124 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 H3BNC9 293 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 M0QYT0 321 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 ADH1AP07327 375 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 ZDHHC11BP0C7U3 371 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 ELF1P32519 619 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 TAF10Q12962 218 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 EIF4EBP2Q13542 120 aaPredicted RBP25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 BOLA3Q53S33 107 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 KCNT1Q5JUK3 1230 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 ARHGAP18Q8N392 663 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 MNS1Q8NEH6 495 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 MYRIPQ8NFW9 859 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 ZWILCHQ9H900 591 aa25.69■■□□□ 1.7
GTF2A1-201ENST00000298173 CTAGE15A4D2H0 777 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 PGRMC1O00264 195 aaKnown RBP25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 PRPSAP2O60256 369 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 IGLV3-25P01717 112 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 CTAGE8P0CG41 777 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 HMGA1P17096 107 aaKnown RBP25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 BTBD8Q5XKL5 378 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 ANKS1BQ7Z6G8 1248 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 CTAGE6Q86UF2 777 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 CTAGE4Q8IX94 777 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 SPATA4Q8NEY3 305 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 TEKT4Q8WW24 435 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 RAPGEF5Q92565 580 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 FBXO32Q969P5 355 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 RPGRIP1Q96KN7 1286 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 MYRFLQ96LU7 910 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 GMIPQ9P107 970 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 C3orf70A6NLC5 250 aaPredicted RBP25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 FGGP02679 453 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 GJC1P36383 396 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 ALDH1A3P47895 512 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 SMTNL2Q2TAL5 461 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 SEL1L2Q5TEA6 688 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 PLPP4Q5VZY2 271 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 SCYL2Q6P3W7 929 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 WDR6Q9NNW5 1121 aaKnown RBP25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 CLIC5Q9NZA1 410 aa25.68■■□□□ 1.7
GTF2A1-201ENST00000298173 INSL5Q9Y5Q6 135 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms