RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ROPN1BQ9BZX4 212 aaPredicted RBP9.55□□□□□ -0.88
PDPN-201ENST00000294489 ROPN1Q9HAT0 212 aaPredicted RBP9.55□□□□□ -0.88
PDPN-201ENST00000294489 PCDH9Q9HC56 1237 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 AAASQ9NRG9 546 aa9.55□□□□□ -0.88
PDPN-201ENST00000294489 DNALI1O14645 258 aaPredicted RBP9.54□□□□□ -0.88
PDPN-201ENST00000294489 EIF3HO15372 352 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDPN-201ENST00000294489 DDHD2O94830 711 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 TTC4O95801 387 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 CD48P09326 243 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 MAGOHP61326 146 aaKnown RBP9.54□□□□□ -0.88
PDPN-201ENST00000294489 GPS1Q13098 491 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 PDK2Q15119 407 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 SH3PXD2AQ5TCZ1 1133 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 GLB1LQ6UWU2 654 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 DSTYKQ6XUX3 929 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.54□□□□□ -0.88
PDPN-201ENST00000294489 FAM172AQ8WUF8 416 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 RSAD2Q8WXG1 361 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 NT5C3BQ969T7 300 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 TBCBQ99426 244 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 TPX2Q9ULW0 747 aaKnown RBP9.54□□□□□ -0.88
PDPN-201ENST00000294489 ARHGEF37A1IGU5 675 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 RASGRF2O14827 1237 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 MCF2LO15068 1137 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 ACSL3O95573 720 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 PCSK1P29120 753 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 PPP2R2AP63151 447 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 TAF5Q15542 800 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 MDH1BQ5I0G3 518 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 LRRC31Q6UY01 552 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 PCGF5Q86SE9 256 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 ZCCHC9Q8N567 271 aaKnown RBP9.54□□□□□ -0.88
PDPN-201ENST00000294489 UHMK1Q8TAS1 419 aaKnown RBP9.54□□□□□ -0.88
PDPN-201ENST00000294489 PEBP4Q96S96 227 aa9.54□□□□□ -0.88
PDPN-201ENST00000294489 DDX23Q9BUQ8 820 aaKnown RBP9.54□□□□□ -0.88
PDPN-201ENST00000294489 SMIM23A6NLE4 172 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 BEST1O76090 585 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 LCP1P13796 627 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 ACAT1P24752 427 aaKnown RBP9.53□□□□□ -0.88
PDPN-201ENST00000294489 MDH1P40925 334 aaKnown RBP9.53□□□□□ -0.88
PDPN-201ENST00000294489 MORF4L2Q15014 288 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 INTS6LQ5JSJ4 861 aaKnown RBP9.53□□□□□ -0.88
PDPN-201ENST00000294489 TTC19Q6DKK2 380 aaPredicted RBP9.53□□□□□ -0.88
PDPN-201ENST00000294489 PRUNE1Q86TP1 453 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 FAM35AQ86V20 835 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 PIGZQ86VD9 579 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 ZNF280BQ86YH2 543 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 RELL1Q8IUW5 271 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 ZMIZ2Q8NF64 920 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 URGCPQ8TCY9 931 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 ZNF333Q96JL9 665 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 CASD1Q96PB1 797 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 SLC2A13Q96QE2 648 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 SMOQ99835 787 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 TBC1D13Q9NVG8 400 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 CALCOCO1Q9P1Z2 691 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 SAE1Q9UBE0 346 aaPredicted RBP9.53□□□□□ -0.88
PDPN-201ENST00000294489 MYBPHLA2RUH7 354 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 AGTP01019 485 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 ZSCAN5DPP0CG00 497 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 EIF3EP60228 445 aaKnown RBP9.53□□□□□ -0.88
PDPN-201ENST00000294489 FAAP100Q0VG06 881 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 CCDC142Q17RM4 750 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 EFHC1Q5JVL4 640 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 GLIS1Q8NBF1 620 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 P3H4Q92791 437 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 TLCD1Q96CP7 247 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 PCED1BQ96HM7 432 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 RBM15Q96T37 977 aaKnown RBP eCLIP9.53□□□□□ -0.88
PDPN-201ENST00000294489 CNOT10Q9H9A5 744 aaKnown RBP9.53□□□□□ -0.88
PDPN-201ENST00000294489 DNAJC17Q9NVM6 304 aaKnown RBP9.53□□□□□ -0.88
PDPN-201ENST00000294489 CLDN5O00501 218 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 DAB1O75553 588 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 B3GAT3O94766 335 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 OAZ2O95190 189 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 EFEMP2O95967 443 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 ITGB1P05556 798 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 BRCC3P46736 316 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 GUCY1A3Q02108 690 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 DPYSL3Q14195 570 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 KYNUQ16719 465 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 BHLHA9Q7RTU4 235 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 METTL23Q86XA0 190 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 RNF169Q8NCN4 708 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 DBF4BQ8NFT6 615 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 CLEC4CQ8WTT0 213 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 SEPT8Q92599 483 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 ARMC5Q96C12 935 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 FAF2Q96CS3 445 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 VWCEQ96DN2 955 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 CCDC77Q9BR77 488 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 BEGAINQ9BUH8 593 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 ADAM33Q9BZ11 813 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 RNF208Q9H0X6 261 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 ADAM7Q9H2U9 754 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 PNPLA8Q9NP80 782 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 TMEM30AQ9NV96 361 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 SHOC2Q9UQ13 582 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 TET1Q8NFU7 2136 aa9.53□□□□□ -0.88
PDPN-201ENST00000294489 MDM4O15151 490 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms