RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CCINQ13939 588 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 TPD52L1Q16890 204 aaPredicted RBP10.3□□□□□ -0.76
CCDC58-201ENST00000291458 SGO2Q562F6 1265 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 TMEM196Q5HYL7 178 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 DGKKQ5KSL6 1271 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 C10orf120Q5SQS8 335 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 C1orf228Q6PIY5 440 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 TMEM270Q6UE05 265 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 C12orf40Q86WS4 652 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 TTC30AQ86WT1 665 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 MIB1Q86YT6 1006 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 SFTPA1Q8IWL2 248 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 SCUBE3Q8IX30 993 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 ELOA2Q8IYF1 753 aaPredicted RBP10.3□□□□□ -0.76
CCDC58-201ENST00000291458 RPLP0P6Q8NHW5 317 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 UBA3Q8TBC4 463 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 OVCA2Q8WZ82 227 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 NDRG1Q92597 394 aaKnown RBP10.3□□□□□ -0.76
CCDC58-201ENST00000291458 CD101Q93033 1021 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 BHMTQ93088 406 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 ERLEC1Q96DZ1 483 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 CNOT6LQ96LI5 555 aaKnown RBP10.3□□□□□ -0.76
CCDC58-201ENST00000291458 HHIPQ96QV1 700 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 DUSP16Q9BY84 665 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 INTS2Q9H0H0 1204 aaKnown RBP10.3□□□□□ -0.76
CCDC58-201ENST00000291458 NUP62CLQ9H1M0 184 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 CLSTN2Q9H4D0 955 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 FBRSL1Q9HCM7 1045 aaKnown RBP10.3□□□□□ -0.76
CCDC58-201ENST00000291458 CSNK1G1Q9HCP0 422 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 ZDHHC4Q9NPG8 344 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 TLR8Q9NR97 1041 aaKnown RBP10.3□□□□□ -0.76
CCDC58-201ENST00000291458 OSER1Q9NX31 292 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 ZSCAN32Q9NX65 697 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 TSPAN16Q9UKR8 245 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 FBXO4Q9UKT5 387 aa10.3□□□□□ -0.76
CCDC58-201ENST00000291458 SMG5Q9UPR3 1016 aaKnown RBP10.3□□□□□ -0.76
CCDC58-201ENST00000291458 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC58-201ENST00000291458 SOBPA7XYQ1 873 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 PROB1E7EW31 1015 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 M0QYV0 167 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 ADH5P11766 374 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 RARGP13631 454 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 KRT5P13647 590 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 TBXAS1P24557 533 aaPredicted RBP10.29□□□□□ -0.76
CCDC58-201ENST00000291458 SLC6A11P48066 632 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 RGS7P49802 495 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 ADIGQ0VDE8 80 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 EFEMP1Q12805 493 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 KCNH2Q12809 1159 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 NR1H3Q13133 447 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 PPP2R5DQ14738 602 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 DHCR24Q15392 516 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 ANO4Q32M45 955 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 LY6G5CQ5SRR4 150 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 PIGZQ86VD9 579 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 DDX42Q86XP3 938 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC58-201ENST00000291458 BBS7Q8IWZ6 715 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 SPEM1Q8N4L4 309 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 DCLK2Q8N568 766 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 NAT16Q8N8M0 369 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 RBBP8NLQ8NC74 664 aaPredicted RBP10.29□□□□□ -0.76
CCDC58-201ENST00000291458 CRACR2AQ9BSW2 395 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 NCDNQ9UBB6 729 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 HESX1Q9UBX0 185 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 SCML2Q9UQR0 700 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 PCDHGA2Q9Y5H1 932 aa10.29□□□□□ -0.76
CCDC58-201ENST00000291458 EML5Q05BV3 1969 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 FAM170AA1A519 330 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 PES1O00541 588 aaKnown RBP10.28□□□□□ -0.76
CCDC58-201ENST00000291458 TRDMT1O14717 391 aaKnown RBP10.28□□□□□ -0.76
CCDC58-201ENST00000291458 SLC9A3R1O14745 358 aaPredicted RBP10.28□□□□□ -0.76
CCDC58-201ENST00000291458 ADH1CP00326 375 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 AFPP02771 609 aaKnown RBP10.28□□□□□ -0.76
CCDC58-201ENST00000291458 ZDHHC11BP0C7U3 371 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 TDGF1P13385 188 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 LCP1P13796 627 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 TCF3P15923 654 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 PFKLP17858 780 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 OPRD1P41143 372 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 MTIF2P46199 727 aaKnown RBP10.28□□□□□ -0.76
CCDC58-201ENST00000291458 TKTL1P51854 596 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 KIF11P52732 1056 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 BCAT1P54687 386 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 MLLT6P55198 1093 aaPredicted RBP10.28□□□□□ -0.76
CCDC58-201ENST00000291458 SLC8A3P57103 927 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 AMPD2Q01433 879 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 APBA1Q02410 837 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 PDE4CQ08493 712 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 MESP2Q0VG99 397 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 CETN1Q12798 172 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 DPCR1Q3MIW9 517 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 C2orf27AQ580R0 203 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 ARHGAP17Q68EM7 881 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 GJB7Q6PEY0 223 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 TPGS1Q6ZTW0 290 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 RSRC2Q7L4I2 434 aaKnown RBP10.28□□□□□ -0.76
CCDC58-201ENST00000291458 TRIM59Q8IWR1 403 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 KIAA2013Q8IYS2 634 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 TTC39CQ8N584 583 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms