RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PCDH9Q9HC56 1237 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 PRMT7Q9NVM4 692 aaPredicted RBP12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 UTP6Q9NYH9 597 aaKnown RBP12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 ERAP1Q9NZ08 941 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 RPTORQ8N122 1335 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 TAF1P21675 1872 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 A8MUI8 341 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 PFDN6O15212 129 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 KLHL2O95198 593 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 GSTT1P30711 240 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 ROR2Q01974 943 aaKnown RBP12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 MCL1Q07820 350 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 TMEM132BQ14DG7 1078 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 POTEAQ6S8J7 498 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 CES3Q6UWW8 571 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 SLITRK1Q96PX8 696 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 DDX50Q9BQ39 737 aaKnown RBP12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 MRPL1Q9BYD6 325 aaKnown RBP12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 SLC5A4Q9NY91 659 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 CYP39A1Q9NYL5 469 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 NOCTQ9UK39 431 aaKnown RBP12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 STAP1Q9ULZ2 295 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 STXBP5LQ9Y2K9 1186 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 B4GALT5O43286 388 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 HBP1O60381 514 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 CTSHP09668 335 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 ZNF286BP0CG31 522 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 UBA1P22314 1058 aaKnown RBP12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 CALB2P22676 271 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 NDST1P52848 882 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 NCKAP1LP55160 1127 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 NFIL3Q16649 462 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 PLEKHO2Q8TD55 490 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 PHRF1Q9P1Y6 1649 aaKnown RBP12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 MYO5AQ9Y4I1 1855 aaKnown RBP12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 AKAP11Q9UKA4 1901 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 LIASO43766 372 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 WDR47O94967 919 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 DLGAP3O95886 979 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 PTPRAP18433 802 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 PTPN4P29074 926 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 SERPINB8P50452 374 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 COPAP53621 1224 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 ARL13BQ3SXY8 428 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 ZDHHC24Q6UX98 284 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 YTHDF3Q7Z739 585 aaKnown RBP12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 KATNAL2Q8IYT4 538 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 ZCCHC9Q8N567 271 aaKnown RBP12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 TMCO5AQ8N6Q1 288 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 STK32AQ8WU08 396 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 ATXN2LQ8WWM7 1075 aaKnown RBP12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 ZNF75CPQ92670 426 aaPredicted RBP12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 SGF29Q96ES7 293 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 TMEM176AQ96HP8 235 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 TMEM120AQ9BXJ8 343 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 PORCNQ9H237 461 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 TEKT2Q9UIF3 430 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 DFFAO00273 331 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 AVILO75366 819 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 CFHP08603 1231 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 STIP1P31948 543 aaKnown RBP12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 S100A5P33763 92 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 PTGIRP43119 386 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 HSD17B4P51659 736 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 CAPSQ13938 189 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 KBTBD12Q3ZCT8 623 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 GPR141Q7Z602 305 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 BRSK2Q8IWQ3 736 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 RNF217Q8TC41 542 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 WDR60Q8WVS4 1066 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 ZNF669Q96BR6 464 aaPredicted RBP12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 UNKQ9C0B0 810 aaKnown RBP12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 IL1RL2Q9HB29 575 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 TSPAN16Q9UKR8 245 aa12.96□□□□□ -0.33
SLC6A1-201ENST00000287766 STRNO43815 780 aa12.96□□□□□ -0.34
SLC6A1-201ENST00000287766 TBC1D12O60347 775 aa12.96□□□□□ -0.34
SLC6A1-201ENST00000287766 UPP2O95045 317 aa12.96□□□□□ -0.34
SLC6A1-201ENST00000287766 AQP5P55064 265 aa12.96□□□□□ -0.34
SLC6A1-201ENST00000287766 TTC39BQ5VTQ0 682 aaPredicted RBP12.96□□□□□ -0.34
SLC6A1-201ENST00000287766 WNK4Q96J92 1243 aa12.96□□□□□ -0.34
SLC6A1-201ENST00000287766 CACYBPQ9HB71 228 aaKnown RBP12.96□□□□□ -0.34
SLC6A1-201ENST00000287766 CLIC5Q9NZA1 410 aa12.96□□□□□ -0.34
SLC6A1-201ENST00000287766 SLC12A6Q9UHW9 1150 aa12.96□□□□□ -0.34
SLC6A1-201ENST00000287766 ZMYM2Q9UBW7 1377 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 SMNDC1O75940 238 aaKnown RBP eCLIP12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 KRT16P08779 473 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 INSRRP14616 1297 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 NUDT2P50583 147 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 DDIASQ8IXT1 998 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 JOSD2Q8TAC2 188 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 RNPEPQ9H4A4 650 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 EXOSC4Q9NPD3 245 aaKnown RBP12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 MAP3K20Q9NYL2 800 aaKnown RBP12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 SHOC2Q9UQ13 582 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 E5RJQ4 531 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 IL18RAPO95256 599 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 MYCP01106 439 aaPredicted RBP12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 PSMC3P17980 439 aa12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 RPL10AP62906 217 aaKnown RBP12.95□□□□□ -0.34
SLC6A1-201ENST00000287766 CRADDP78560 199 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms