RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CHRNDQ07001 517 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 TEFQ10587 303 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 BFSP1Q12934 665 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 ADAM9Q13443 819 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 PLS1Q14651 629 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 KCNB1Q14721 858 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 WDR72Q3MJ13 1102 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 FLYWCH1Q4VC44 716 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 FBLN7Q53RD9 439 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 SLC9C2Q5TAH2 1124 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 SNX30Q5VWJ9 437 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 LIN54Q6MZP7 749 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 TMTC3Q6ZXV5 915 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 LURAP1LQ8IV03 231 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 ZDHHC14Q8IZN3 488 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 TTC5Q8N0Z6 440 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 TXLNBQ8N3L3 684 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 PPM1NQ8N819 430 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 MOSPD2Q8NHP6 518 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 PLBD2Q8NHP8 589 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 GDAP1Q8TB36 358 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 FAM71BQ8TC56 605 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 BRSK1Q8TDC3 778 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 OTUD7AQ8TE49 926 aaPredicted RBP4.95□□□□□ -1.62
CD44-202ENST00000278385 DENND1AQ8TEH3 1009 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 RTF1Q92541 710 aaKnown RBP4.95□□□□□ -1.62
CD44-202ENST00000278385 CHFRQ96EP1 664 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 MSLNLQ96KJ4 702 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 CCDC43Q96MW1 224 aaKnown RBP4.95□□□□□ -1.62
CD44-202ENST00000278385 ELF4Q99607 663 aaPredicted RBP4.95□□□□□ -1.62
CD44-202ENST00000278385 FSD1Q9BTV5 496 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 TEX13AQ9BXU3 409 aaPredicted RBP4.95□□□□□ -1.62
CD44-202ENST00000278385 ZMAT3Q9HA38 289 aaKnown RBP4.95□□□□□ -1.62
CD44-202ENST00000278385 SMURF1Q9HCE7 757 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 RXFP3Q9NSD7 469 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 INTS10Q9NVR2 710 aaKnown RBP4.95□□□□□ -1.62
CD44-202ENST00000278385 RAI14Q9P0K7 980 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 MYO1AQ9UBC5 1043 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 ZFP69BQ9UJL9 534 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 OGDHLQ9ULD0 1010 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 ZDHHC9Q9Y397 364 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 NR2E3Q9Y5X4 410 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 KDM6AO15550 1401 aaPredicted RBP4.95□□□□□ -1.62
CD44-202ENST00000278385 BTAF1O14981 1849 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 CASZ1Q86V15 1759 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 TCRBV5S4A2TA0A5A2 114 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 C9orf118A6NHY6 69 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 AQP12BA6NM10 295 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 FAM90A27PA6NNH2 459 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 ZNF839A8K0R7 811 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 ISM1B1AKI9 464 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 AP3D1O14617 1153 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 PHGDHO43175 533 aaKnown RBP4.94□□□□□ -1.62
CD44-202ENST00000278385 MTSS1O43312 755 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 TRIM13O60858 407 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 A1BGP04217 495 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 ACADMP11310 421 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 EDNRBP24530 442 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 PRKAR2BP31323 418 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 CRKLP46109 303 aaKnown RBP4.94□□□□□ -1.62
CD44-202ENST00000278385 KIF11P52732 1056 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 CTSWP56202 376 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 TGFB2P61812 414 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 RAB1AP62820 205 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 CREB5Q02930 508 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 MAP3K12Q12852 859 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 SLC39A6Q13433 755 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 CTXN3Q4LDR2 81 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 CPZQ66K79 652 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 C11orf88Q6PI97 169 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 SMIM5Q71RC9 77 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 RALYLQ86SE5 291 aaKnown RBP4.94□□□□□ -1.62
CD44-202ENST00000278385 SESTD1Q86VW0 696 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 CHD1LQ86WJ1 897 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 DNAJC10Q8IXB1 793 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 ADGRG2Q8IZP9 1017 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 LGI4Q8N135 537 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 DTX3Q8N9I9 347 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 ATP11CQ8NB49 1132 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 SPC24Q8NBT2 197 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 KCTD6Q8NC69 237 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 IL31RAQ8NI17 732 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 SH3RF2Q8TEC5 729 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 FEM1CQ96JP0 617 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 GBP4Q96PP9 640 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 FNBP1Q96RU3 617 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 HGH1Q9BTY7 390 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 QRSL1Q9H0R6 528 aaKnown RBP4.94□□□□□ -1.62
CD44-202ENST00000278385 SLC39A2Q9NP94 309 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 SAYSD1Q9NPB0 183 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 INCENPQ9NQS7 918 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 TOMM22Q9NS69 142 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 TM7SF3Q9NS93 570 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 GJB4Q9NTQ9 266 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 SPATA6Q9NWH7 488 aaPredicted RBP4.94□□□□□ -1.62
CD44-202ENST00000278385 PCSK1NQ9UHG2 260 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 MOSPD1Q9UJG1 213 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 LAMP5Q9UJQ1 280 aa4.94□□□□□ -1.62
CD44-202ENST00000278385 LIMCH1Q9UPQ0 1083 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms