RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 RAD54LQ92698 747 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 CATSPER2Q96P56 530 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 C1QTNF1Q9BXJ1 281 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 CRYL1Q9Y2S2 319 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 HBS1LQ9Y450 684 aaKnown RBP8.09□□□□□ -1.11
USP3-201ENST00000268049 AK5Q9Y6K8 562 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 MTSS1O43312 755 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 CLK3P49761 638 aaKnown RBP8.09□□□□□ -1.11
USP3-201ENST00000268049 DGKEP52429 567 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 GRIK3Q13003 919 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 ZNF394Q53GI3 561 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 ESRP1Q6NXG1 681 aaKnown RBP8.09□□□□□ -1.11
USP3-201ENST00000268049 CRLF3Q8IUI8 442 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 EXD1Q8NHP7 514 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 USP33Q8TEY7 942 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 OR8D1Q8WZ84 308 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 TUBGCP3Q96CW5 907 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 HPDLQ96IR7 371 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 NELL2Q99435 816 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 PDCD2LQ9BRP1 358 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 CASTOR2A6NHX0 329 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 USP27XA6NNY8 438 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 VSTM5A8MXK1 200 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 CACNB4O00305 520 aaPredicted RBP8.09□□□□□ -1.11
USP3-201ENST00000268049 VTNP04004 478 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 PSEN1P49768 467 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 RAB14P61106 215 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 HPCAP84074 193 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 SP2Q02086 613 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 CAMK2GQ13555 558 aaPredicted RBP8.09□□□□□ -1.11
USP3-201ENST00000268049 KPNB1Q14974 876 aaKnown RBP8.09□□□□□ -1.11
USP3-201ENST00000268049 ANKRD40Q6AI12 368 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 SFR1Q86XK3 245 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 LZTR1Q8N653 840 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 KCNS3Q9BQ31 491 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 STARD13Q9Y3M8 1113 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 PCDHB3Q9Y5E6 796 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 SESN1Q9Y6P5 492 aa8.09□□□□□ -1.11
USP3-201ENST00000268049 GSTA4O15217 222 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 FTCDO95954 541 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 TNNI3P19429 210 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 MLH1P40692 756 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 CRYBB1P53674 252 aaPredicted RBP8.09□□□□□ -1.12
USP3-201ENST00000268049 DR1Q01658 176 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 LBRQ14739 615 aaKnown RBP8.09□□□□□ -1.12
USP3-201ENST00000268049 XKR4Q5GH76 650 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 HP1BP3Q5SSJ5 553 aaPredicted RBP8.09□□□□□ -1.12
USP3-201ENST00000268049 TREML2Q5T2D2 321 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 HEATR6Q6AI08 1181 aaKnown RBP8.09□□□□□ -1.12
USP3-201ENST00000268049 PKN3Q6P5Z2 889 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 ANGPTL8Q6UXH0 198 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 CAMKK1Q8N5S9 505 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 DTX3LQ8TDB6 740 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 MTMR9Q96QG7 549 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 SYBUQ9NX95 663 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 TUBA8Q9NY65 449 aaPredicted RBP8.09□□□□□ -1.12
USP3-201ENST00000268049 GIT1Q9Y2X7 761 aa8.09□□□□□ -1.12
USP3-201ENST00000268049 CES2O00748 559 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 SLURP2P0DP57 97 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 BLKP51451 505 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 CLCN3P51790 818 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 SULT2A1Q06520 285 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 PTPN21Q16825 1174 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 SPDYE7PQ495Y7 208 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 UGT3A1Q6NUS8 523 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 UNC13DQ70J99 1090 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 HDDC2Q7Z4H3 204 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 KIRREL3Q8IZU9 778 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 SIX5Q8N196 739 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 KRT35Q92764 455 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 MRPL40Q9NQ50 206 aaKnown RBP8.08□□□□□ -1.12
USP3-201ENST00000268049 RRN3Q9NYV6 651 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 DKK3Q9UBP4 350 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 ARL2BPQ9Y2Y0 163 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 PCDHA5Q9Y5H7 936 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 FSHRP23945 695 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.08□□□□□ -1.12
USP3-201ENST00000268049 PXYLP1Q8TE99 480 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 ANKS1AQ92625 1134 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 TRIM63Q969Q1 353 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 TMA16Q96EY4 203 aaKnown RBP8.08□□□□□ -1.12
USP3-201ENST00000268049 A1CFQ9NQ94 594 aaKnown RBP8.08□□□□□ -1.12
USP3-201ENST00000268049 APPL1Q9UKG1 709 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 UBA6A0AVT1 1052 aaPredicted RBP8.08□□□□□ -1.12
USP3-201ENST00000268049 TARSL2A2RTX5 802 aaKnown RBP8.08□□□□□ -1.12
USP3-201ENST00000268049 MEIS2O14770 477 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 OGTO15294 1046 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 EXTL3O43909 919 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 GCATO75600 419 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 IRAK1P51617 712 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 TCEA2Q15560 299 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 FSCBQ5H9T9 825 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 BTNL9Q6UXG8 535 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 MMGT1Q8N4V1 131 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 ZNF579Q8NAF0 562 aaKnown RBP8.08□□□□□ -1.12
USP3-201ENST00000268049 AVL9Q8NBF6 648 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 CNBD2Q96M20 576 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 IL12RB2Q99665 862 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 LMAN2LQ9H0V9 348 aa8.08□□□□□ -1.12
USP3-201ENST00000268049 IL23AQ9NPF7 189 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms