RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ARP10275 920 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 ETS1P14921 441 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 PAX3P23760 479 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 RPS12P25398 132 aaKnown RBP13.61□□□□□ -0.23
NUP54-201ENST00000264883 ENTPD1P49961 510 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 AQP5P55064 265 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 PFKPQ01813 784 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 SHROOM1Q2M3G4 852 aaPredicted RBP13.61□□□□□ -0.23
NUP54-201ENST00000264883 USP41Q3LFD5 358 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 TTC13Q8NBP0 860 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 DCAKDQ8WVC6 231 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 MFSD14AQ96MC6 490 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 ACAP3Q96P50 834 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 TCHPQ9BT92 498 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 OSBPL6Q9BZF3 934 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 TUT1Q9H6E5 874 aaKnown RBP13.61□□□□□ -0.23
NUP54-201ENST00000264883 SELENONQ9NZV5 590 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 CNTN3Q9P232 1028 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 AP4B1Q9Y6B7 739 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 DENND3A2RUS2 1198 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 TCP10L2B9ZVM9 353 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 WNT10BO00744 389 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 ADCY6O43306 1168 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 ITM2AO43736 263 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 ZBED1O96006 694 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 FAM58BPP0C7Q3 252 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 KITP10721 976 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 KCTD21Q4G0X4 260 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 FAM83AQ86UY5 434 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 MAP4K3Q8IVH8 894 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 PYROXD1Q8WU10 500 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 FBXL18Q96ME1 805 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 C7orf26Q96N11 449 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 CCT7Q99832 543 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 ACSS3Q9H6R3 686 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 LIN28AQ9H9Z2 209 aaKnown RBP13.61□□□□□ -0.23
NUP54-201ENST00000264883 PGAP2Q9UHJ9 254 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 DRG1Q9Y295 367 aaKnown RBP13.61□□□□□ -0.23
NUP54-201ENST00000264883 NR2E3Q9Y5X4 410 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 ZNFX1Q9P2E3 1918 aaKnown RBP13.61□□□□□ -0.23
NUP54-201ENST00000264883 SF3B1O75533 1304 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■■■■ 120.6
NUP54-201ENST00000264883 H3BNX3 289 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 GOLGA8SH3BPF8 625 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 GOLGA8MH3BSY2 632 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 GDF11O95390 407 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 RBP3P10745 1247 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 AOC1P19801 751 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 GLRA2P23416 452 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 QARSP47897 775 aaKnown RBP13.6□□□□□ -0.23
NUP54-201ENST00000264883 CDK9P50750 372 aaKnown RBP13.6□□□□□ -0.23
NUP54-201ENST00000264883 RAB15P59190 212 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 PDAP1Q13442 181 aaKnown RBP13.6□□□□□ -0.23
NUP54-201ENST00000264883 GK3PQ14409 553 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 ZNF362Q5T0B9 420 aaPredicted RBP13.6□□□□□ -0.23
NUP54-201ENST00000264883 SYCP2LQ5T4T6 812 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 RNASEH2BQ5TBB1 312 aaKnown RBP13.6□□□□□ -0.23
NUP54-201ENST00000264883 FAM160B2Q86V87 743 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 MARCOQ9UEW3 520 aaPredicted RBP13.6□□□□□ -0.23
NUP54-201ENST00000264883 HERC5Q9UII4 1024 aaKnown RBP13.6□□□□□ -0.23
NUP54-201ENST00000264883 DOLKQ9UPQ8 538 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 SHOC2Q9UQ13 582 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 POMPQ9Y244 141 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 ZHX2Q9Y6X8 837 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 TISP43B9A030 160 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 LIASO43766 372 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 ATP5BP06576 529 aaKnown RBP13.6□□□□□ -0.23
NUP54-201ENST00000264883 KRT5P13647 590 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 BST1Q10588 318 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 TGFBIQ15582 683 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 ZYXQ15942 572 aaKnown RBP13.6□□□□□ -0.23
NUP54-201ENST00000264883 HIF1AQ16665 826 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 PGM2L1Q6PCE3 622 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 PCGF5Q86SE9 256 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 TMEM110Q86TL2 294 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 RCOR2Q8IZ40 523 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 SERAC1Q96JX3 654 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 C1orf112Q9NSG2 853 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 CDH22Q9UJ99 828 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 DNPEPQ9ULA0 475 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 PADI4Q9UM07 663 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 COQ6Q9Y2Z9 468 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 PPME1Q9Y570 386 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 MYPNQ86TC9 1320 aa13.6□□□□□ -0.23
NUP54-201ENST00000264883 IQANK1A0A1B0GTG1 560 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 FUOMA2VDF0 154 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 TRPA1O75762 1119 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 GH2P01242 217 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 GSTT2P0CG29 244 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 GSTT2BP0CG30 244 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 RXRGP48443 463 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 JAG1P78504 1218 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 TMPRSS15P98073 1019 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 MON1BQ7L1V2 547 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 NANOGNBQ7Z5D8 188 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 AMIGO2Q86SJ2 522 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 CBWD2Q8IUF1 395 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 PPP4R1Q8TF05 950 aa13.59□□□□□ -0.23
NUP54-201ENST00000264883 TUBA8Q9NY65 449 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms