RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 COL6A3P12111 3177 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 GOLGA6L9A6NEM1 432 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 ACTN4O43707 911 aaKnown RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 ERLIN2O94905 339 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 RETP07949 1114 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 SNRNP70P08621 437 aaKnown RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 FOSL2P15408 326 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 ALOX12P18054 663 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 ADCY8P40145 1251 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 SLC1A4P43007 532 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 SLC12A3P55017 1021 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 ETF1P62495 437 aaKnown RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 TPM4P67936 248 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 ZNF543Q08ER8 600 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 NIPAL4Q0D2K0 466 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 RNF219Q5W0B1 726 aaPredicted RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 IL27RAQ6UWB1 636 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 CHST15Q7LFX5 561 aaPredicted RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 FAM178BQ8IXR5 827 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 TXLNBQ8N3L3 684 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 NIPA2Q8N8Q9 360 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 ANKS4BQ8N8V4 417 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 SPDYE1Q8NFV5 336 aaPredicted RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 CPLX3Q8WVH0 158 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 MRPS27Q92552 414 aaKnown RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 HDAC11Q96DB2 347 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 ZNF274Q96GC6 653 aaPredicted RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 SHDQ96IW2 340 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 CCDC74BQ96LY2 380 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 FAM193BQ96PV7 902 aaPredicted RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 DSCC1Q9BVC3 393 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 DENND2DQ9H6A0 471 aaPredicted RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 KBTBD4Q9NVX7 518 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 ORC3Q9UBD5 711 aaPredicted RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 ADD3Q9UEY8 706 aaKnown RBP5.91□□□□□ -1.46
ITCH-201ENST00000262650 FRMPD4Q14CM0 1322 aa5.91□□□□□ -1.46
ITCH-201ENST00000262650 A0A1W2PPH5 198 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 PGPEP1LA6NFU8 196 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 A6NLC8 198 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 BECN2A8MW95 431 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 PRPSAP2O60256 369 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 FZD6O60353 706 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 SEC22BO75396 215 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 FGBP02675 491 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 CXCL10P02778 98 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 ENO2P09104 434 aaPredicted RBP5.9□□□□□ -1.46
ITCH-201ENST00000262650 SUPT20HL2P0C7V6 817 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 HOXC8P31273 242 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 SSTP61278 116 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 TUBA4AP68366 448 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 ZNF252P-AS1Q0IIN9 211 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 SCRN1Q12765 414 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 SNCBQ16143 134 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 PLA2G4EQ3MJ16 856 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 MCMDC2Q4G0Z9 681 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 HSP90AA5PQ58FG0 334 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 GNASQ5JWF2 1037 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 CWF19L1Q69YN2 538 aaKnown RBP5.9□□□□□ -1.46
ITCH-201ENST00000262650 ARMCX5Q6P1M9 558 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 ZNF365Q70YC5 407 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 STK32CQ86UX6 486 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 REXO1Q8N1G1 1221 aaKnown RBP5.9□□□□□ -1.46
ITCH-201ENST00000262650 PRR18Q8N4B5 295 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 OR8K3Q8NH51 312 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 FAM216AQ8WUB2 273 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 PEX13Q92968 403 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 PRICKLE1Q96MT3 831 aaPredicted RBP5.9□□□□□ -1.46
ITCH-201ENST00000262650 CITED4Q96RK1 184 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 HNRNPABQ99729 332 aaKnown RBP5.9□□□□□ -1.46
ITCH-201ENST00000262650 TMEM47Q9BQJ4 181 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 TRIT1Q9H3H1 467 aaKnown RBP5.9□□□□□ -1.46
ITCH-201ENST00000262650 UCK1Q9HA47 277 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 PPT2Q9UMR5 302 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 DNM3Q9UQ16 869 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.9□□□□□ -1.46
ITCH-201ENST00000262650 OR6C74A6NCV1 312 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 H3BQV1 296 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 JAK2O60674 1132 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 CTDNEP1O95476 244 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 TUBB4BP68371 445 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 HTD2P86397 168 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 SPAG1Q07617 926 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 BMPR2Q13873 1038 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 COL9A3Q14050 684 aaPredicted RBP5.9□□□□□ -1.46
ITCH-201ENST00000262650 IKBKEQ14164 716 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 NCAPHQ15003 741 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 USH1GQ495M9 461 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 TRIM65Q6PJ69 517 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 OGFOD3Q6PK18 319 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 ZNF589Q86UQ0 364 aaPredicted RBP5.9□□□□□ -1.46
ITCH-201ENST00000262650 GATAD2AQ86YP4 633 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 CREG2Q8IUH2 290 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 ZNF507Q8TCN5 953 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 KCNG4Q8TDN1 519 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 KRT35Q92764 455 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 CABS1Q96KC9 395 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 MTG1Q9BT17 334 aaPredicted RBP5.9□□□□□ -1.46
ITCH-201ENST00000262650 AP5M1Q9H0R1 490 aa5.9□□□□□ -1.46
ITCH-201ENST00000262650 MTIF3Q9H2K0 278 aaKnown RBP5.9□□□□□ -1.46
ITCH-201ENST00000262650 BHMT2Q9H2M3 363 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms