RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 TRIP10Q15642 601 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 B4GALNT2Q8NHY0 566 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 PIP4K2CQ8TBX8 421 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.5□□□□□ -0.25
SNX1-201ENST00000261889 PHACTR1Q9C0D0 580 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 MIS12Q9H081 205 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 R3HDMLQ9H3Y0 253 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 C17orf75Q9HAS0 396 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 FAM49BQ9NUQ9 324 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 APPL1Q9UKG1 709 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 SHOC2Q9UQ13 582 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 GINS2Q9Y248 185 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 DNAJC16Q9Y2G8 782 aa13.5□□□□□ -0.25
SNX1-201ENST00000261889 C3orf70A6NLC5 250 aaPredicted RBP13.49□□□□□ -0.25
SNX1-201ENST00000261889 MCF2LO15068 1137 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 CFLARO15519 480 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 AHCYL1O43865 530 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 USP12O75317 370 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 RNF8O76064 485 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 HMGCRP04035 888 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 RPS12P25398 132 aaKnown RBP13.49□□□□□ -0.25
SNX1-201ENST00000261889 IGBP1P78318 339 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 CNPY1Q3B7I2 92 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 SPDYE2Q495Y8 402 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 RABGAP1LQ5R372 815 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 IRGCQ6NXR0 463 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 LARGE2Q8N3Y3 721 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 APOPT1Q96IL0 206 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 FBXL18Q96ME1 805 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 IWS1Q96ST2 819 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 PICK1Q9NRD5 415 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 TMPRSS4Q9NRS4 437 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 ADAMTS6Q9UKP5 1117 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 ASB3Q9Y575 518 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 ADCY6O43306 1168 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 RPS6KA3P51812 740 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 MYBPC2Q14324 1141 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 OLFML2BQ68BL8 750 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 C15orf39Q6ZRI6 1047 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 USP37Q86T82 979 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 NIM1KQ8IY84 436 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 PHTF2Q8N3S3 785 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 FAM156AQ8NDB6 213 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 B3GNT5Q9BYG0 378 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 JPH1Q9HDC5 661 aaPredicted RBP13.49□□□□□ -0.25
SNX1-201ENST00000261889 TBC1D22BQ9NU19 505 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 CAPN8A6NHC0 703 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 IRF6O14896 467 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 TRPA1O75762 1119 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 CIB2O75838 187 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 AMHP03971 560 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 SOX11P35716 441 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 AP1B1Q10567 949 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 PHF13Q86YI8 300 aaPredicted RBP13.49□□□□□ -0.25
SNX1-201ENST00000261889 PNPLA1Q8N8W4 532 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 TMEM35BQ8NCS4 154 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 FAM81BQ96LP2 452 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 SEPT10Q9P0V9 454 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 SLC24A2Q9UI40 661 aa13.49□□□□□ -0.25
SNX1-201ENST00000261889 SPECC1L-ADORA2AF8WAN1 911 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 M0QYV0 167 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 BPIFB4P59827 614 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 SLC25A11Q02978 314 aaKnown RBP13.48□□□□□ -0.25
SNX1-201ENST00000261889 LMNB2Q03252 620 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 ZNF699Q32M78 642 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 TRNP1Q6NT89 227 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 IYDQ6PHW0 289 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 CMC1Q7Z7K0 106 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 TMPRSS6Q8IU80 811 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 GALNT15Q8N3T1 639 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 GALNT4Q8N4A0 578 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 USP13Q92995 863 aaPredicted RBP13.48□□□□□ -0.25
SNX1-201ENST00000261889 TRIM11Q96F44 468 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 STX18Q9P2W9 335 aaKnown RBP13.48□□□□□ -0.25
SNX1-201ENST00000261889 PPP1R1BQ9UD71 204 aaPredicted RBP13.48□□□□□ -0.25
SNX1-201ENST00000261889 FEM1BQ9UK73 627 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 FIS1Q9Y3D6 152 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 PSAT1Q9Y617 370 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 RABGGTBP53611 331 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 HMGCS2P54868 508 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 YWHAZP63104 245 aaKnown RBP13.48□□□□□ -0.25
SNX1-201ENST00000261889 ROR2Q01974 943 aaKnown RBP13.48□□□□□ -0.25
SNX1-201ENST00000261889 DSG1Q02413 1049 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 PSMD6Q15008 389 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 OR6B2Q6IFH4 312 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 NDRG1Q92597 394 aaKnown RBP13.48□□□□□ -0.25
SNX1-201ENST00000261889 ECSITQ9BQ95 431 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 IQANK1A0A1B0GTG1 560 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 ITGAVP06756 1048 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 CXCL8P10145 99 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 ARRB2P32121 409 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 ROR1Q01973 937 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 CUL3Q13618 768 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 KLHL38Q2WGJ6 581 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 ZNF778Q96MU6 729 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 IFT122Q9HBG6 1241 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 PLAC1Q9HBJ0 212 aa13.48□□□□□ -0.25
SNX1-201ENST00000261889 PHIPQ8WWQ0 1821 aa13.47□□□□□ -0.25
SNX1-201ENST00000261889 INO80B-WBP1J3KQ70 363 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms