RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 CYP2F1P24903 491 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 ABCE1P61221 599 aaKnown RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 CCDC15Q0P6D6 951 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 SGCGQ13326 291 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 BOP1Q14137 746 aaKnown RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 MIR1-1HGQ9H1L0 117 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 ZDHHC6Q9H6R6 413 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 H2AFY2Q9P0M6 372 aaPredicted RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 INO80Q9ULG1 1556 aaPredicted RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 O00370 1275 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 HALP42357 657 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 TBX4P57082 545 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 PLOD1Q02809 727 aaPredicted RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 USP38Q8NB14 1042 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 FAM129AQ9BZQ8 928 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 MANSC1Q9H8J5 431 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 SLC27A5Q9Y2P5 690 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 COL5A2P05997 1499 aaPredicted RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 PLA2G6O60733 806 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 MRPL28Q13084 256 aaKnown RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 BMPR2Q13873 1038 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 INPP5AQ14642 412 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 ZNF555Q8NEP9 628 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 TUBGCP3Q96CW5 907 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 ARHGEF9O43307 516 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 TUBP50607 506 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 PTPN11Q06124 597 aaPredicted RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 DNERQ8NFT8 737 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 PDGFCQ9NRA1 345 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 PXDNLA1KZ92 1463 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 PDZK1P1A8MUH7 402 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 WDR47O94967 919 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 ELNP15502 786 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 BST2Q10589 180 aaKnown RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 TEDDM1Q5T9Z0 273 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 ZNF697Q5TEC3 545 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 ITIH5Q86UX2 942 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 NOA1Q8NC60 698 aaKnown RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 MYOCQ99972 504 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 PPP2R3BQ9Y5P8 575 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 CEMIPQ8WUJ3 1361 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 GNG14A0A1W2PPG7 69 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 PTPRAP18433 802 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 TNNI3P19429 210 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 TFE3P19532 575 aaPredicted RBP12.54□□□□□ -0.4
SPG11-201ENST00000261866 PRIM2P49643 509 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 SERPINB9P50453 376 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 NFIL3Q16649 462 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 DEFB115Q30KQ5 88 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 TEX9Q8N6V9 391 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 SERAC1Q96JX3 654 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 CLPBQ9H078 707 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 DSEQ9UL01 958 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 TCRBV5S4A2TA0A5A2 114 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 SOAT2O75908 522 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 GEMIN4P57678 1058 aaKnown RBP12.54□□□□□ -0.4
SPG11-201ENST00000261866 TP53BP2Q13625 1128 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 PKN1Q16512 942 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 IYDQ6PHW0 289 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 LINC00523Q86TU6 105 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 ANKS1AQ92625 1134 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 CORO1BQ9BR76 489 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 KIAA1683Q9H0B3 1180 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 F8W810 466 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 EML1O00423 815 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 CCNT2O60583 730 aaKnown RBP12.54□□□□□ -0.4
SPG11-201ENST00000261866 LGALS2P05162 132 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 CTNNB1P35222 781 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 DMTNQ08495 405 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 STRA8Q7Z7C7 330 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 COLGALT1Q8NBJ5 622 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 HELQQ8TDG4 1101 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 ERP27Q96DN0 273 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 ACOX2Q99424 681 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 ZSWIM1Q9BR11 485 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 MKNK1Q9BUB5 465 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 MRPS15P82914 257 aaKnown RBP12.54□□□□□ -0.4
SPG11-201ENST00000261866 EVX2Q03828 476 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 LAMB3Q13751 1172 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 SLC13A5Q86YT5 568 aaPredicted RBP12.54□□□□□ -0.4
SPG11-201ENST00000261866 ZIM3Q96PE6 472 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 ATP13A1Q9HD20 1204 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 VANGL2Q9ULK5 521 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 ANKRD63C9JTQ0 380 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 SLITRK3O94933 977 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 E2F7Q96AV8 911 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 C17orf75Q9HAS0 396 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 A1CFQ9NQ94 594 aaKnown RBP12.54□□□□□ -0.4
SPG11-201ENST00000261866 KPNA3O00505 521 aaPredicted RBP12.54□□□□□ -0.4
SPG11-201ENST00000261866 LTFP02788 710 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 AMPD1P23109 780 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 MDH1P40925 334 aaKnown RBP12.54□□□□□ -0.4
SPG11-201ENST00000261866 FAM83EQ2M2I3 478 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 SHROOM1Q2M3G4 852 aaPredicted RBP12.54□□□□□ -0.4
SPG11-201ENST00000261866 MYO1HQ8N1T3 1032 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 CASKIN2Q8WXE0 1202 aa12.54□□□□□ -0.4
SPG11-201ENST00000261866 DNAJC3Q13217 504 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 TRADDQ15628 312 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 BOLA3Q53S33 107 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 AHCYL2Q96HN2 611 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms