RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 MCRS1Q96EZ8 462 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 NAP1L3Q99457 506 aaPredicted RBP11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 TULP2O00295 520 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 KCNK3O14649 394 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 CEP104O60308 925 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 FSHRP23945 695 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 CCR1P32246 355 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 DAOAP59103 153 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 CHSY1Q86X52 802 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 RHOT1Q8IXI2 618 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 C17orf53Q8N3J3 647 aaPredicted RBP11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 ADAM32Q8TC27 787 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 VWCEQ96DN2 955 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 PRKD2Q9BZL6 878 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 ISCUQ9H1K1 167 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 IRAK3Q9Y616 596 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 SRGAP2O75044 1071 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 CFHP08603 1231 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 IFNAR2P48551 515 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 DDX42Q86XP3 938 aaKnown RBP eCLIP11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 TTC9BQ8N6N2 239 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 HDAC7Q8WUI4 952 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 SPATA17Q96L03 361 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 CEP295NLQ96MC4 621 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 EPAS1Q99814 870 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 SLC4A5Q9BY07 1137 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 HSFX1Q9UBD0 423 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 ZMYM5Q9UJ78 669 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 FBXW11Q9UKB1 542 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 STK25O00506 426 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 TRUB2O95900 331 aaKnown RBP11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 ARHGAP25P42331 645 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 NR1H3Q13133 447 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 GRIN2CQ14957 1233 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 KAZNQ674X7 775 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 TMEM110Q86TL2 294 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 CRIPAKQ8N1N5 446 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 RTP3Q9BQQ7 232 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 DCLK3Q9C098 648 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 MIF4GDA9UHW6 222 aaKnown RBP11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 ZRANB2O95218 330 aaKnown RBP eCLIP11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 GJB6O95452 261 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 CD300LGQ6UXG3 332 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 FAM131BQ86XD5 332 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 XYLT1Q86Y38 959 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 RFX6Q8HWS3 928 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 MYLIPQ8WY64 445 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 LMCD1Q9NZU5 365 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 FRMPD3Q5JV73 1810 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 PAPSS1O43252 624 aaPredicted RBP11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 BEST1O76090 585 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 ABLIM3O94929 683 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 SEC24AO95486 1093 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 RHOP08100 348 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 UNGP13051 313 aaPredicted RBP11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 MATKP42679 507 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 RWDD2BP57060 319 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 MTA1Q13330 715 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 MAMLD1Q13495 774 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 BOLA3Q53S33 107 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 UBR7Q8N806 425 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 EXOC4Q96A65 974 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 HYOU1Q9Y4L1 999 aa11.61□□□□□ -0.55
TNFAIP3-201ENST00000237289 RFC1P35251 1148 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 CYP4F8P98187 520 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 DUSP6Q16828 381 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 NUGGCQ68CJ6 796 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 RSPO2Q6UXX9 243 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 NUDT18Q6ZVK8 323 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 BTBD6Q96KE9 485 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 NAALADL1Q9UQQ1 740 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 SCML2Q9UQR0 700 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 YJEFN3A6XGL0 299 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 E7ENQ6 273 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 CDH6P55285 790 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 SLC26A9Q7LBE3 791 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 SPRED2Q7Z698 418 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 MAIP1Q8WWC4 291 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 DDX1Q92499 740 aaKnown RBP11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 LRCH3Q96II8 777 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 CFAP57Q96MR6 1250 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 DDX56Q9NY93 547 aaKnown RBP11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 TFR2Q9UP52 801 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 SLC9A3R1O14745 358 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 ZBTB24O43167 697 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 DAB1O75553 588 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 GJA1P17302 382 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 ITIH3Q06033 890 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 SLC35F6Q8N357 371 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 ARL14EPQ8N8R7 260 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 PSMG2Q969U7 264 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 CAPZA3Q96KX2 299 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 OSGEPQ9NPF4 335 aa11.6□□□□□ -0.55
TNFAIP3-201ENST00000237289 H3BRJ5 948 aa11.59□□□□□ -0.55
TNFAIP3-201ENST00000237289 AAK1Q2M2I8 961 aa11.59□□□□□ -0.55
TNFAIP3-201ENST00000237289 MON1BQ7L1V2 547 aa11.59□□□□□ -0.55
TNFAIP3-201ENST00000237289 SLFN11Q7Z7L1 901 aa11.59□□□□□ -0.55
TNFAIP3-201ENST00000237289 RBM41Q96IZ5 413 aaKnown RBP11.59□□□□□ -0.55
TNFAIP3-201ENST00000237289 NECTIN4Q96NY8 510 aa11.59□□□□□ -0.55
TNFAIP3-201ENST00000237289 VN1R3Q9BXE9 311 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms