RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 KIAA0895Q8NCT3 520 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 HSPH1Q92598 858 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 EPB41L1Q9H4G0 881 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 SLC7A8Q9UHI5 535 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 VPS4AQ9UN37 437 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 NCANO14594 1321 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 TOP3AQ13472 1001 aaPredicted RBP13.27□□□□□ -0.28
VAMP4-201ENST00000236192 SUZ12Q15022 739 aaKnown RBP13.27□□□□□ -0.28
VAMP4-201ENST00000236192 HERC3Q15034 1050 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 DEPDC1Q5TB30 811 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 TTC23LQ6PF05 361 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 SNX32Q86XE0 403 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 ZSWIM2Q8NEG5 633 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 ZFP28Q8NHY6 868 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 TUFT1Q9NNX1 390 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 ENTPD7Q9NQZ7 604 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 TMEM59LQ9UK28 342 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 ATP7AQ04656 1500 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 RALBP11234 206 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 ITGAXP20702 1163 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 IFRD2Q12894 506 aaPredicted RBP13.27□□□□□ -0.28
VAMP4-201ENST00000236192 ARL13BQ3SXY8 428 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 FASTKD1Q53R41 847 aaKnown RBP13.27□□□□□ -0.28
VAMP4-201ENST00000236192 LAYNQ6UX15 382 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 DNAAF3Q8N9W5 541 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 ZFYVE28Q9HCC9 887 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 KLHL11Q9NVR0 708 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 HEY1Q9Y5J3 304 aa13.27□□□□□ -0.28
VAMP4-201ENST00000236192 LINC00854A0A1B0GVQ3 168 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 RGS5O15539 181 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 PCCAP05165 728 aaPredicted RBP13.27□□□□□ -0.29
VAMP4-201ENST00000236192 MYBP10242 640 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 PRKACAP17612 351 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 PRKCIP41743 596 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 STT3AP46977 705 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 PKNOX1P55347 436 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 GIT2Q14161 759 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 SLC1A5Q15758 541 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 HPS6Q86YV9 775 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 RNF148Q8N7C7 305 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 GOLM1Q8NBJ4 401 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 SLC30A5Q8TAD4 765 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 ACMSDQ8TDX5 336 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 LIN28AQ9H9Z2 209 aaKnown RBP13.27□□□□□ -0.29
VAMP4-201ENST00000236192 WDR41Q9HAD4 459 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 ZDHHC18Q9NUE0 388 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 LDLRAP1Q5SW96 308 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 MYO1HQ8N1T3 1032 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 PIWIL2Q8TC59 973 aaKnown RBP13.27□□□□□ -0.29
VAMP4-201ENST00000236192 PANX3Q96QZ0 392 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 SSU72Q9NP77 194 aaKnown RBP13.27□□□□□ -0.29
VAMP4-201ENST00000236192 SLC9A2Q9UBY0 812 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 FRMPD2Q68DX3 1309 aaPredicted RBP13.27□□□□□ -0.29
VAMP4-201ENST00000236192 MYPNQ86TC9 1320 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 USP32Q8NFA0 1604 aa13.27□□□□□ -0.29
VAMP4-201ENST00000236192 CSPG5O95196 566 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 CTSWP56202 376 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 TMEM62Q0P6H9 643 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 NFX1Q12986 1120 aaKnown RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 SEL1L3Q68CR1 1132 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 TMC7Q7Z402 723 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 GAB3Q8WWW8 586 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 VPS33BQ9H267 617 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 GPRC5DQ9NZD1 345 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 OAS1P00973 400 aaKnown RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 CREB1P16220 341 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 CNTFP26441 200 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 GPD2P43304 727 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 ABCE1P61221 599 aaKnown RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 BNIP3Q12983 259 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 COL9A3Q14050 684 aaPredicted RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 ADGRE1Q14246 886 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 ACAP2Q15057 778 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 PGS1Q32NB8 556 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 FAM47CQ5HY64 1035 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 PDZD4Q76G19 769 aaPredicted RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 CEP295NLQ96MC4 621 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 POP1Q99575 1024 aaKnown RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 RTKNQ9BST9 563 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 CHORDC1Q9UHD1 332 aaPredicted RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 EMSYQ7Z589 1322 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 GTPBP10A4D1E9 387 aaKnown RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 SLCO1B7G3V0H7 640 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 J3QRK9 145 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 USP12O75317 370 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 PAGE2BQ5JRK9 111 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 ENOSF1Q7L5Y1 443 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 C16orf62Q7Z3J2 963 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 EFCAB3Q8N7B9 438 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 RAB2BQ8WUD1 216 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 PHF21AQ96BD5 680 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 C12orf43Q96C57 262 aaKnown RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 FBXL8Q96CD0 374 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 POLE3Q9NRF9 147 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 GSG1L2A8MUP6 293 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 PRPSAP2O60256 369 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 ENDOUP21128 410 aaKnown RBP13.26□□□□□ -0.29
VAMP4-201ENST00000236192 OGFOD2Q6N063 350 aa13.26□□□□□ -0.29
VAMP4-201ENST00000236192 CCDC149Q6ZUS6 474 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms