RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ZNF263O14978 683 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 CBFA2T2O43439 604 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 FBXO21O94952 628 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 ZBED1O96006 694 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 ZDHHC11BP0C7U3 371 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 TKTL1P51854 596 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 UBASH3AP57075 661 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 ZNF445P59923 1031 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 FANCCQ00597 558 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 GOLGA8FQ08AF8 430 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 GOLGA8DPQ0D2H9 430 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 ARHGAP29Q52LW3 1261 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 RAB41Q5JT25 222 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 STXBP5Q5T5C0 1151 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 APTXQ7Z2E3 356 aaKnown RBP11.86□□□□□ -0.51
SF3B6-201ENST00000233468 ZNF677Q86XU0 584 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 MSANTD4Q8NCY6 345 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 UBA3Q8TBC4 463 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 BPIFB1Q8TDL5 484 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 STK32AQ8WU08 396 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 SLC35F5Q8WV83 523 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 TFAP2BQ92481 460 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 SECISBP2LQ93073 1101 aaKnown RBP11.86□□□□□ -0.51
SF3B6-201ENST00000233468 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
SF3B6-201ENST00000233468 SHDQ96IW2 340 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 KXD1Q9BQD3 176 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 TRIM62Q9BVG3 475 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 NUP58Q9BVL2 599 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 MIS12Q9H081 205 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 BRD9Q9H8M2 597 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 CNGB3Q9NQW8 809 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 SLC2A4RGQ9NR83 387 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 CLIC5Q9NZA1 410 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 CHORDC1Q9UHD1 332 aaPredicted RBP11.86□□□□□ -0.51
SF3B6-201ENST00000233468 PCDHGC3Q9UN70 934 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 ARHGAP26Q9UNA1 814 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 R4GN57 208 aa11.86□□□□□ -0.51
SF3B6-201ENST00000233468 F8VZ95 297 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 CHADO15335 359 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 TADA3O75528 432 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 GLULP15104 373 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 FCARP24071 287 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 SOX5P35711 763 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 VIPR2P41587 438 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 SLC7A9P82251 487 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 APBA1Q02410 837 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 PKDCCQ504Y2 493 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 DPY19L2P1Q6NXN4 242 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 KLHDC10Q6PID8 442 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 C1orf228Q6PIY5 440 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 SCML4Q8N228 414 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 ZNF276Q8N554 614 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 ARL14EPQ8N8R7 260 aaPredicted RBP11.85□□□□□ -0.51
SF3B6-201ENST00000233468 IRGQQ8WZA9 623 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 DNASE1L2Q92874 299 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 FOXQ1Q9C009 403 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 GANQ9H2C0 597 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 LHX5Q9H2C1 402 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 TRPV5Q9NQA5 729 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 ST7Q9NRC1 585 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 GMIPQ9P107 970 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 DLGAP2Q9P1A6 1054 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 NAGPAQ9UK23 515 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 MYO6Q9UM54 1294 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 DNAH14Q0VDD8 3507 aa11.85□□□□□ -0.51
SF3B6-201ENST00000233468 PATJQ8NI35 1801 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 C2orf78A6NCI8 922 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 SLC9A3R1O14745 358 aaPredicted RBP11.84□□□□□ -0.51
SF3B6-201ENST00000233468 MAP3K7O43318 606 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 TLR5O60602 858 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 OAS1P00973 400 aaKnown RBP11.84□□□□□ -0.51
SF3B6-201ENST00000233468 MBL2P11226 248 aaPredicted RBP11.84□□□□□ -0.51
SF3B6-201ENST00000233468 CYP11B1P15538 503 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 TCF3P15923 654 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 GDI1P31150 447 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 CLCN1P35523 988 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 ATP5C1P36542 298 aaKnown RBP11.84□□□□□ -0.51
SF3B6-201ENST00000233468 GPD2P43304 727 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 GPC5P78333 572 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 AMPD2Q01433 879 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 FCHO2Q0JRZ9 810 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 ADIGQ0VDE8 80 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 NR1I3Q14994 352 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 BTBD8Q5XKL5 378 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 PM20D1Q6GTS8 502 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 VITQ6UXI7 678 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 RSRC2Q7L4I2 434 aaKnown RBP11.84□□□□□ -0.51
SF3B6-201ENST00000233468 GPRIN1Q7Z2K8 1008 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 SLC47A2Q86VL8 602 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 TMEM35BQ8NCS4 154 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 ZNF397Q8NF99 534 aaPredicted RBP11.84□□□□□ -0.51
SF3B6-201ENST00000233468 CSGALNACT1Q8TDX6 532 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 IPO4Q8TEX9 1081 aaKnown RBP11.84□□□□□ -0.51
SF3B6-201ENST00000233468 USP13Q92995 863 aaPredicted RBP11.84□□□□□ -0.51
SF3B6-201ENST00000233468 EXOC4Q96A65 974 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 MSANTD3Q96H12 275 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 EDEM3Q9BZQ6 932 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 NUCKS1Q9H1E3 243 aaKnown RBP11.84□□□□□ -0.51
SF3B6-201ENST00000233468 NLRC4Q9NPP4 1024 aa11.84□□□□□ -0.51
SF3B6-201ENST00000233468 OLA1Q9NTK5 396 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms