RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 VPS11Q9H270 941 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 CPSF3Q9UKF6 684 aaKnown RBP15.67■□□□□ 0.1
EFNB1-201ENST00000204961 STARD13Q9Y3M8 1113 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 SNCAIPQ9Y6H5 919 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 NUP205Q92621 2012 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 I3L4J1 428 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 STK10O94804 968 aaKnown RBP15.67■□□□□ 0.1
EFNB1-201ENST00000204961 ITGAVP06756 1048 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 CSH1P0DML2 217 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 CSH2P0DML3 217 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 CYP3A5P20815 502 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 PITX1P78337 314 aaPredicted RBP15.67■□□□□ 0.1
EFNB1-201ENST00000204961 ZNF618Q5T7W0 954 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 RNF148Q8N7C7 305 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 MRPL45Q9BRJ2 306 aaKnown RBP15.67■□□□□ 0.1
EFNB1-201ENST00000204961 C20orf27Q9GZN8 174 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 CPSF2Q9P2I0 782 aaKnown RBP15.67■□□□□ 0.1
EFNB1-201ENST00000204961 SHOC2Q9UQ13 582 aa15.67■□□□□ 0.1
EFNB1-201ENST00000204961 WDR27A2RRH5 827 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 MLH1P40692 756 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 PDE1BQ01064 536 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 RASA2Q15283 850 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 FKBP1CQ5VVH2 108 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 TNS4Q8IZW8 715 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 ZNF483Q8TF39 744 aaPredicted RBP15.66■□□□□ 0.1
EFNB1-201ENST00000204961 ACSS3Q9H6R3 686 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 RNPEPL1Q9HAU8 725 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 DDX56Q9NY93 547 aaKnown RBP15.66■□□□□ 0.1
EFNB1-201ENST00000204961 ADGRA2Q96PE1 1338 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 C3orf70A6NLC5 250 aaPredicted RBP15.66■□□□□ 0.1
EFNB1-201ENST00000204961 PMM2O15305 246 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 MAFO75444 373 aaPredicted RBP15.66■□□□□ 0.1
EFNB1-201ENST00000204961 GPD1P21695 349 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 SLC25A3Q00325 362 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 KCTD2Q14681 263 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 ACSBG2Q5FVE4 666 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 MAGEC3Q8TD91 643 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 LENG1Q96BZ8 264 aaPredicted RBP15.66■□□□□ 0.1
EFNB1-201ENST00000204961 VCPIP1Q96JH7 1222 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 SNTG2Q9NY99 539 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 EURLQ9NYK6 297 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 TIMM13Q9Y5L4 95 aaPredicted RBP15.66■□□□□ 0.1
EFNB1-201ENST00000204961 CSADQ9Y600 493 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 AK5Q9Y6K8 562 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 MCM3APO60318 1980 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 THSD7AQ9UPZ6 1657 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 IQANK1A0A1B0GTG1 560 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 NEMP1O14524 444 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 TXNDC9O14530 226 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 DGKIO75912 1065 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 CALB2P22676 271 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 IGFBP6P24592 240 aaPredicted RBP15.66■□□□□ 0.1
EFNB1-201ENST00000204961 RFC5P40937 340 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 TMEM154Q6P9G4 183 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 BBS12Q6ZW61 710 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 SNRNP25Q9BV90 132 aaKnown RBP15.66■□□□□ 0.1
EFNB1-201ENST00000204961 PIDD1Q9HB75 910 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 ASNSD1Q9NWL6 643 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 SLC5A4Q9NY91 659 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 SYNPO2Q9UMS6 1093 aa15.66■□□□□ 0.1
EFNB1-201ENST00000204961 BRWD3Q6RI45 1802 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 GOLGA8QA0A0J9YX86 632 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 GOLGA8OA6NCC3 632 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 GOLGA8NF8WBI6 632 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 TPBGLP0DKB5 382 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 TPH1P17752 444 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 SDC4P31431 198 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 EFHC2Q5JST6 749 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.65■□□□□ 0.1
EFNB1-201ENST00000204961 TREML1Q86YW5 311 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 RDM1Q8NG50 284 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 RNF217Q8TC41 542 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 TAS2R1Q9NYW7 299 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 DPPA5A6NC42 116 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 ATP9BO43861 1147 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 SMIM24O75264 130 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 ARF4P18085 180 aaPredicted RBP15.65■□□□□ 0.1
EFNB1-201ENST00000204961 SLC8A3P57103 927 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 KLHL38Q2WGJ6 581 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 CMC1Q7Z7K0 106 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 BANPQ8N9N5 519 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 STK32AQ8WU08 396 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 AFG1LQ8WV93 481 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 LRRC37AA6NMS7 1700 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 A8MXQ7 604 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 CLDN5O00501 218 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 OSBPP22059 807 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 EIF4BP23588 611 aaKnown RBP15.65■□□□□ 0.1
EFNB1-201ENST00000204961 POLE2P56282 527 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 MCL1Q07820 350 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 RNF220Q5VTB9 566 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 SNX30Q5VWJ9 437 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 CES4AQ5XG92 561 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 SPATA6LQ8N4H0 392 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 PLD5Q8N7P1 536 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 PCDH19Q8TAB3 1148 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 NKD2Q969F2 451 aaPredicted RBP15.65■□□□□ 0.1
EFNB1-201ENST00000204961 STRIP2Q9ULQ0 834 aa15.65■□□□□ 0.1
EFNB1-201ENST00000204961 FARP1Q9Y4F1 1045 aaPredicted RBP15.65■□□□□ 0.1
EFNB1-201ENST00000204961 KIF13BQ9NQT8 1826 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms