RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Tcf25Q8R3L2 676 aaKnown RBP15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Olfr356Q8VFP5 315 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Rad9aQ9Z0F6 389 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Gm13212B1ASQ7 799 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Lipo2D3YY49 398 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Calhm3J3QMI4 347 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Msh3P13705 1091 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 VdrP48281 422 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Slc38a5Q3U1J0 479 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Ldhal6bQ8BVP2 382 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Mcrs1Q99L90 462 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 SncaipQ99ME3 962 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Pard3bQ9CSB4 1203 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 VasnQ9CZT5 673 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Rfc5Q9D0F6 339 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Pak1ip1Q9DCE5 382 aaKnown RBP15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Gtf2ird1Q9JI57 1104 aaKnown RBP15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 JrklB2RRL2 523 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Kctd18E0CZ26 429 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 DsppP97399 934 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Fnip1Q68FD7 1165 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Snip1Q8BIZ6 383 aaKnown RBP15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Sept11Q8C1B7 431 aaKnown RBP15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Samd7Q8C8Y5 445 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Adgrg2Q8CJ12 1009 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Clec4a3Q8JZX6 237 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Mtss1Q8R1S4 759 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Mrps2Q924T2 291 aaKnown RBP15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Sytl2Q99N50 950 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Polr2aP08775 1970 aaKnown RBP15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Foxd1Q61345 456 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Cpa4Q6P8K8 420 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Baiap2l2Q80Y61 522 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Nlrp4bQ8C6J9 863 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 S100pbpQ9D5K4 396 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Oxct2bQ9ESL0 520 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Oxct2aQ9JJN4 520 aa15.9■□□□□ 0.14
Upf1-202ENSMUST00000215817 Mmrn1B2RPV6 1210 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Kif5aP33175 1027 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Irs1P35569 1233 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Nkx2-5P42582 318 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Cd300aQ6SJQ0 318 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Abraxas1Q8BPZ8 407 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Proser2Q8C5R2 471 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 P3h4Q8K2B0 443 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Vangl2Q91ZD4 521 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Cttnbp2nlQ99LJ0 638 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Cdk5rap3Q99LM2 503 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Thumpd2Q9CZB3 528 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Slfn14V9GXG1 899 aa15.89■□□□□ 0.14
Upf1-202ENSMUST00000215817 Akap5D3YVF0 745 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Scarf2P59222 833 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 TankP70347 448 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Slc20a1Q61609 681 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Fam167aQ6P1G6 215 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Ube2q2Q8K2Z8 378 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Ino80bQ99PT3 375 aaKnown RBP15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Vps28Q9D1C8 221 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Hic1Q9R1Y5 733 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Ttc23lA6H6E9 458 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Sh2d4bA6X942 431 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Usp35M0QWN7 1009 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Cdc6O89033 562 aaKnown RBP15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Msx3P70354 204 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Nrp1P97333 923 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 PtprcapQ64697 197 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Ggnbp1Q6K1E7 370 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Rtl3Q6P1Y1 553 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Zfp454Q80Y34 536 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Colgalt1Q8K297 617 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Basp1Q91XV3 226 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Atxn7l3bQ3UD01 97 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Q6PAC4 1279 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Pdk1Q8BFP9 434 aaKnown RBP15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Q8BGD0 127 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Fbxo43Q8CDI2 640 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Uroc1Q8VC12 676 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 Ophn1Q99J31 802 aa15.89■□□□□ 0.13
Upf1-202ENSMUST00000215817 AspgA0JNU3 564 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Kcnk16G5E845 292 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Uhmk1P97343 419 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Ccndbp1Q3TVC7 356 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Robo4Q8C310 1012 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 IntS13Q8QZV7 732 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Rpn2Q9DBG6 631 aaKnown RBP15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Cyth1Q9QX11 398 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Map3k6Q9WTR2 1291 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Elf4Q9Z2U4 655 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Clca3bE9PUL3 1044 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Gm17535J3KMR8 224 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Sypl2O89104 264 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Hoxc13P50207 328 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Cntnap5bQ0V8T8 1292 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 InscQ3HNM7 579 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Agxt2Q3UEG6 513 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Map3k10Q66L42 940 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Prr18Q6PAN7 307 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Mfsd14bQ8CIA9 507 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Olfr703Q9EPF5 319 aa15.88■□□□□ 0.13
Upf1-202ENSMUST00000215817 Padi3Q9Z184 664 aa15.88■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms