RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Tnfaip1O70479 316 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Nr3c1P06537 783 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Pabpc1P29341 636 aaKnown RBP12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Trim43bP86448 445 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 HltfQ6PCN7 1003 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Teddm1aQ810U2 305 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Nup107Q8BH74 926 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Mta1Q8K4B0 715 aaKnown RBP12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Nme5Q99MH5 211 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Lpin2Q99PI5 893 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 PpieQ9QZH3 301 aaKnown RBP12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Vmn2r31L7N1Z4 861 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Fgd3O88842 733 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Serpina3cP29621 417 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Drg1P32233 367 aaKnown RBP12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Dlgap3Q6PFD5 977 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Tdrd1Q99MV1 1172 aa12.9□□□□□ -0.34
Col6a3-208ENSMUST00000188587 Lmnb1P14733 588 aaKnown RBP12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Fcer2P20693 331 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 HexdcQ3U4H6 486 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 CcnjlQ5SRT8 387 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 PapolgQ6PCL9 739 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Rps6kl1Q8R2S1 544 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Ino80bQ99PT3 375 aaKnown RBP12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Mapk13Q9Z1B7 366 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Gcnt4E9Q649 455 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Gm17093F6XGJ4 214 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Myl12aQ6ZWQ9 172 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Olfr1037Q7TR84 321 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Sel1l3Q80TS8 1137 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 TbcelQ8C5W3 424 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Hmgcs2P54869 508 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 HadhQ61425 314 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Glt8d2Q640P4 349 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Tmem161aQ8VCA6 480 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Slc25a38Q91XD8 326 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 CatsperzQ9CQP8 194 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Col14a1Q80X19 1797 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Mroh4G3X8W1 983 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 CkmP07310 381 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 HmbsP22907 361 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Cdc14aQ6GQT0 603 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Ifi44Q8BV66 422 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Ttc16Q8C1F5 767 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Gtf2a1lQ8R4I4 468 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Adam7O35227 789 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Colgalt1Q8K297 617 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Sumf1Q8R0F3 372 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Ndufv1Q91YT0 464 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Ggt7Q99JP7 662 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Gmeb1Q9JL60 562 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Sae1Q9R1T2 350 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 CemipQ8BI06 1361 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 RhocQ62159 193 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 1700001J03RikQ80ZR8 219 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Wdr98Q8VC42 657 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Lrrc71Q9D3W5 558 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Dlgap1Q9D415 992 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Rims2Q9EQZ7 1530 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Grin2dQ03391 1323 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 1700003F12RikA2AKE5 210 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Ncam1P13595 1115 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 GclcP97494 637 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 SelpQ01102 768 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Zc3h15Q3TIV5 426 aaKnown RBP12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Tgfbrap1Q3UR70 860 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Oca2Q62052 833 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Abcg2Q7TMS5 657 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Hspa13Q8BM72 471 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 3830417A13RikQ8BQJ2 303 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 RpainQ9CWY9 219 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Hes6Q9JHE6 224 aa12.89□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Abca8aQ8K442 1620 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Bnc1O35914 961 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 IdsQ08890 552 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Ssxb10Q6XAR7 170 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Lrrc75bQ7TPD7 306 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Epb41l5Q8BGS1 731 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Tjp3Q9QXY1 905 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Atp8b4A2ANX3 1194 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 CrnnD3YUU6 520 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Nckap1P28660 1128 aaKnown RBP12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Rasip1Q3U0S6 961 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Tespa1Q3U132 458 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Siglec10Q80ZE3 688 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 UstQ8BUB6 407 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 PreplQ8C167 725 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Ccdc17Q8CE13 565 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Cgref1Q8R1U2 281 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Vangl2Q91ZD4 521 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Mrpl57Q9CQF8 102 aaKnown RBP12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Tbx18Q9EPZ6 613 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 GhrlQ9EQX0 117 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Gm1141B9EJU1 475 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 AfpP02772 605 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Surf2P09926 257 aaKnown RBP12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Celf4Q7TSY6 486 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Rxfp2Q91ZZ5 737 aa12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Mettl16Q9CQG2 553 aaKnown RBP12.88□□□□□ -0.35
Col6a3-208ENSMUST00000188587 Zbed6D2EAC2 980 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms