RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Gm5478D3Z6R0 159 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Lrrc8bQ5DU41 803 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Atp11bQ6DFW5 1175 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Dctn2Q99KJ8 402 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 GabrqQ9JLF1 638 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Rhox3cA2AWM0 215 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Srsf11E9Q6E5 511 aaKnown RBP12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Rhox3hL7MU37 215 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Fgf15O35622 218 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Grid2ipQ0QWG9 1203 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Rhox3aQ4TU90 215 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Pick1Q62083 416 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Tmc8Q7TN58 722 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Samd4bQ80XS6 687 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 P2ry10Q8BFU7 328 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Tssc4Q9JHE7 317 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Mbd2Q9Z2E1 414 aa12.77□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 PdynO35417 248 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Bbs1Q3V3N7 593 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Ppp1r14bQ62084 147 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Znf280cQ6P3Y5 742 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Tmem161aQ8VCA6 480 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 GsdmcQ99NB5 468 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Tjp2Q9Z0U1 1167 aaKnown RBP12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 4921501E09RikA0A0R4J054 908 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Tcp10cE9Q046 482 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 H2-Eb1P04230 264 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Sun2Q8BJS4 731 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 GaleQ8R059 347 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Rps6kl1Q8R2S1 544 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Sf3b3Q921M3 1217 aaKnown RBP12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Ferd3lQ923Z4 168 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Nme5Q99MH5 211 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Znfx1Q8R151 1909 aaKnown RBP12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Alkbh1P0CB42 389 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 PrkceP16054 737 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Rit2P70425 217 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 PhgdhQ61753 533 aaKnown RBP12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Mtmr4Q91XS1 1190 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Atp6v1g2Q9WTT4 118 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Gm10477F6SW83 55 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Il17raQ60943 864 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Luzp2Q8BGY3 345 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Hus1Q8BQY8 280 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Pcyox1Q9CQF9 505 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Olfr271-ps1A0A1L1SQH2 283 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Cd86P42082 309 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 R3hdm2Q80TM6 1044 aaKnown RBP12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Mxd3Q80US8 206 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Scube2Q9JJS0 997 aa12.77□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Shmt1P50431 478 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Irx2P81066 474 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Traf3Q60803 567 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Cyp3a11Q64459 504 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Nxnl1Q8VC33 217 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Trip11E9Q512 1976 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 4930407I10RikD3Z5T8 1512 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Gm6882J3KMT3 313 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Zfp607aQ3TQG9 686 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Gm10662Q3UT86 313 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Cpa1Q7TPZ8 419 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Sept9Q80UG5 583 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Q8CIL4 281 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 E2f4Q8R0K9 410 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Atf6F6VAN0 656 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Kif1cO35071 1100 aaKnown RBP12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Capn13Q3UW68 665 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Soat1Q61263 540 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 PolnQ7TQ07 864 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Cpne3Q8BT60 533 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Vangl2Q91ZD4 521 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Nmd3Q99L48 503 aaKnown RBP12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Gtf2h1Q9DBA9 547 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 PtenO08586 403 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Nfkb1P25799 971 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Cdk7Q03147 346 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Rasip1Q3U0S6 961 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Hecw2Q6I6G8 1578 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Fkbp1aP26883 108 aaKnown RBP12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Rbm20Q3UQS8 1199 aaKnown RBP12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Ksr1Q61097 873 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Mief1Q8BGV8 463 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Map3k21Q8VDG6 1002 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Sorcs3Q8VI51 1219 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Pcdhb1Q91Y08 818 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Mtnd3P03899 115 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Dpf2Q61103 391 aaKnown RBP12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Pcsk9Q80W65 694 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Lrrc24Q8BHA1 521 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Sgsm3Q8VCZ6 750 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Ciapin1Q8WTY4 309 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 4930519G04RikQ9CPT7 205 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Cdh19E9Q3A7 770 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Tnk2O54967 1055 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Ripk2P58801 539 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Rad51Q08297 339 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Gja6Q6S5G4 283 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Rusc1Q8BG26 893 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Ticam2Q8BJQ4 232 aa12.76□□□□□ -0.37
Vcpip1-201ENSMUST00000057438 Tbc1d10cQ8C9V1 444 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms