RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Tbc1d22aQ8R5A6 516 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Olfr1416Q8VGU4 312 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 CinpQ9D0V8 212 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Rasgef1cQ9D300 466 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Actrt1Q9D9J3 376 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Rab27aQ9ERI2 221 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Msh5Q9QUM7 833 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tnks1bp1P58871 1720 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Lipo2D3YY49 398 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Vmn2r63E9Q0K5 859 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gm9268E9Q0M3 861 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Vmn2r62K7N712 859 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tnfrsf11bO08712 401 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ppargc1aO70343 797 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Prl2c2P04095 224 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Il6stQ00560 917 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Serpina6Q06770 397 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tmem26Q3UP23 366 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gstt2Q61133 244 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Kcnj11Q61743 390 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 ThrspQ62264 150 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Casc4Q6P2L7 435 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Vgll2Q8BGW8 322 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gpc3Q8CFZ4 579 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Celf3Q8CIN6 465 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Znf445Q8R2V3 986 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Abtb1Q99LJ2 478 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pold3Q9EQ28 462 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Sv2aQ9JIS5 742 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 RalbQ9JIW9 206 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ppp2r3cQ9JK24 453 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tbk1Q9WUN2 729 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Drg1P32233 367 aaKnown RBP10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Dpysl3Q62188 570 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Hsdl1Q8BTX9 330 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Vmn1r213Q8R278 384 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Lars2Q8VDC0 902 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Bcl10Q9Z0H7 233 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Atp6v1c1Q9Z1G3 382 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Mindy4b-psA0A1W2P7H6 457 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Slc16a6B1AT66 607 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Lilra5D3Z7A9 295 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 F830016B08RikG3UWE2 416 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 CrymO54983 313 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 EpoP07321 192 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Entpd7Q3TCT4 606 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Atxn7l3bQ3UD01 97 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Plppr4Q7TME0 766 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Znf618Q80YY7 953 aaKnown RBP10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tspan14Q8QZY6 270 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Rnf8Q8VC56 488 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Alg9Q8VDI9 611 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Rev1Q920Q2 1249 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 TrabdQ99JY4 376 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Kremen1Q99N43 473 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gm45208A0A140LJ36 292 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tbc1d16A2ABG4 766 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Grid2ipQ0QWG9 1203 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Nat8lQ3UGX3 299 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ankrd27Q3UMR0 1048 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 ScinQ60604 715 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Sel1l3Q80TS8 1137 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Igdcc3Q8BQC3 813 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Usp20Q8C6M1 916 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Smtnl2Q8CI12 456 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Prpf39Q8K2Z2 665 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 GsdmcQ99NB5 468 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ergic2Q9CR89 377 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 CygbQ9CX80 190 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Olfr271-ps1A0A1L1SQH2 283 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Vmn2r55G3UWZ4 781 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Mfsd4b4J3QNS5 503 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gm8897L7N294 181 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Vmn2r53L7N473 806 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Galnt4O08832 578 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Slc27a2O35488 620 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Il13ra2O88786 383 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Mcpt1P11034 246 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ndufs6P52503 116 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Cdk7Q03147 346 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Aars2Q14CH7 980 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 RasefQ5RI75 627 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ecm1Q61508 559 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Cyp2c29Q64458 490 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 BegainQ68EF6 600 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Zfyve28Q6ZPK7 905 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Prpf18Q8BM39 342 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 PygbQ8CI94 843 aaKnown RBP10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Satb2Q8VI24 733 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pdk3Q922H2 415 aaKnown RBP10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Rtfdc1Q99K95 307 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gabbr1Q9WV18 960 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 BcorQ8CGN4 1759 aa10.24□□□□□ -0.77
Ldlr-201ENSMUST00000034713 AspgA0JNU3 564 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Gm44G3UW88 330 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Mroh4G3X8W1 983 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Wnt7aP24383 349 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Epb41P48193 858 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Kcna2P63141 499 aa10.23□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Fam198aQ3UY90 562 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms