RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Tbc1d13Q8R3D1 400 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gps1Q99LD4 471 aaKnown RBP13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 SncaipQ99ME3 962 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tmem86aQ9D8N3 241 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Abcg8Q9DBM0 673 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Stk32bQ9JJX8 414 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Sfmbt1Q9JMD1 863 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 NagaQ9QWR8 415 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ism2D3Z6A3 493 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gimd1E9PW74 217 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gm6588E9Q3K0 461 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Abhd12bG3UZN6 359 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Usp10P52479 792 aaKnown RBP13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 YwhagP61982 247 aaKnown RBP13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Mark3Q03141 753 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Sh2d1b2Q45HK4 132 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Spa17Q62252 149 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Prmt6Q6NZB1 378 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ccdc159Q8C963 411 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Trim32Q8CH72 655 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gsto2Q8K2Q2 248 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Sec63Q8VHE0 760 aaKnown RBP13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Usp3Q91W36 520 aaKnown RBP13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pcdhac2Q91Y09 1006 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Lpin3Q99PI4 848 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Dcp2Q9CYC6 422 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Polr3eQ9CZT4 710 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Sun1Q9D666 913 aaKnown RBP13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Kcnq4Q9JK97 696 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Irx5Q9JKQ4 484 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Kcnq2Q9Z351 759 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Rpl9-ps1S4R1R7 191 aa13.19□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gm6657A0A1B0GRJ3 277 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gm29133A0A1B0GT72 266 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 DgkdE9PUQ8 1220 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tnfrsf11bO08712 401 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ebf2O08792 575 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 NoctO35710 429 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 GnazO70443 355 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 PigrO70570 771 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Cxcr2P35343 359 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Trim80Q3V061 624 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Hsph1Q61699 858 aaKnown RBP13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tpd52Q62393 224 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Parp6Q6P6P7 630 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ddhd1Q80YA3 547 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Cwf19l2Q8BG79 887 aaKnown RBP13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Prpsap2Q8R574 369 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Smyd2Q8R5A0 433 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ubxn2aQ99KJ0 258 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tubd1Q9R1K7 455 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 ThadaA8C756 1938 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ccdc13D3YV10 709 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 ChkaO54804 453 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pias1O88907 651 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Lmo2P25801 158 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tap2P36371 702 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Slc8a1P70414 970 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 InhbaQ04998 424 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 ChukQ60680 745 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Mysm1Q69Z66 819 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Fbxo41Q6NS60 873 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Trpm4Q7TN37 1213 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ankrd52Q8BTI7 1076 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Arhgef33Q8BW86 850 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Zfp263Q8CF60 680 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Angel2Q8K1C0 544 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tdrd7Q8K1H1 1086 aaKnown RBP13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tasp1Q8R1G1 420 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Alas1Q8VC19 642 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 YarsQ91WQ3 528 aaKnown RBP13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pex6Q99LC9 981 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tssk3Q9D2E1 268 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Lrrc71Q9D3W5 558 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Subh2bvQ9D9Z7 123 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 ParvbQ9ES46 365 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Sh3pxd2bA2AAY5 908 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ccnyl1D3YUJ3 367 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 C87414E9PWI7 475 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Mmp3P28862 477 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 CtswP56203 371 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Sox8Q04886 464 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Stt3bQ3TDQ1 823 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 PkdccQ5RJI4 492 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Sh3rf1Q69ZI1 892 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Spata24Q6P926 205 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Olfr299Q7TS05 330 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Cwf19l1Q8CI33 537 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 PygbQ8CI94 843 aaKnown RBP13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Prpf39Q8K2Z2 665 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Afg3l1Q920A7 789 aaKnown RBP13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Q922R1 422 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gdap2Q9DBL2 498 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Extl1Q9JKV7 669 aa13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 QkiQ9QYS9 341 aaKnown RBP13.18□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Daw1D3Z7A5 415 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Lilra5D3Z7A9 295 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Gm10719E9Q7T3 227 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 SmgcF6VRN1 385 aa13.17□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tmigd3G3X8R9 209 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms