RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 PDR5P33302 1511 aaKnown RBP-4□□□□□ -3.05
snR55snR55 YCL001W-BQ96VH2 84 aa-4.01□□□□□ -3.05
snR55snR55 YER137CP40083 148 aaKnown RBP-4.02□□□□□ -3.05
snR55snR55 YCF1P39109 1515 aaKnown RBP-4.05□□□□□ -3.06
snR55snR55 DOP1Q03921 1698 aa-4.06□□□□□ -3.06
snR55snR55 ESC1Q03661 1658 aaKnown RBP-4.07□□□□□ -3.06
snR55snR55 YOL166W-AQ8TGJ1 51 aa-4.09□□□□□ -3.06
snR55snR55 CWP2P43497 92 aa-4.1□□□□□ -3.07
snR55snR55 MLP1Q02455 1875 aaKnown RBP-4.1□□□□□ -3.07
snR55snR55 TCB3Q03640 1545 aaKnown RBP-4.11□□□□□ -3.07
snR55snR55 GCN2P15442 1659 aa-4.12□□□□□ -3.07
snR55snR55 VMR1P38735 1592 aa-4.13□□□□□ -3.07
snR55snR55 YOL131WQ08270 108 aa-4.14□□□□□ -3.07
snR55snR55 LTE1P07866 1435 aa-4.14□□□□□ -3.07
snR55snR55 YCR075W-AQ3E830 75 aa-4.16□□□□□ -3.08
snR55snR55 IML1P47170 1584 aa-4.16□□□□□ -3.08
snR55snR55 TOM1Q03280 3268 aa-4.18□□□□□ -3.08
snR55snR55 YJL133C-AQ3E7A3 74 aa-4.2□□□□□ -3.08
snR55snR55 NUP188P52593 1655 aaKnown RBP-4.23□□□□□ -3.09
snR55snR55 UFD4P33202 1483 aa-4.26□□□□□ -3.09
snR55snR55 YPR010C-AA5Z2X5 72 aa-4.27□□□□□ -3.09
snR55snR55 CDC25P04821 1589 aa-4.28□□□□□ -3.09
snR55snR55 YBT1P32386 1661 aa-4.29□□□□□ -3.1
snR55snR55 YSY6P38374 65 aa-4.32□□□□□ -3.1
snR55snR55 YFL041W-AQ3E817 63 aa-4.35□□□□□ -3.11
snR55snR55 ZEO1Q08245 113 aa-4.36□□□□□ -3.11
snR55snR55 STU1P38198 1513 aa-4.38□□□□□ -3.11
snR55snR55 SCC2Q04002 1493 aa-4.4□□□□□ -3.11
snR55snR55 DDR2P89113 61 aa-4.43□□□□□ -3.12
snR55snR55 ATG2P53855 1592 aa-4.46□□□□□ -3.12
snR55snR55 YIL102C-AQ2V2P5 75 aa-4.51□□□□□ -3.13
snR55snR55 HIR3P47171 1648 aa-4.54□□□□□ -3.14
snR55snR55 BUD3P25558 1636 aa-4.56□□□□□ -3.14
snR55snR55 COX9P07255 59 aa-4.61□□□□□ -3.15
snR55snR55 YHR213W-AQ8TGT4 77 aa-4.62□□□□□ -3.15
snR55snR55 NUP159P40477 1460 aa-4.62□□□□□ -3.15
snR55snR55 YLL066W-BQ8TGJ7 56 aa-4.63□□□□□ -3.15
snR55snR55 YLR342W-AQ3E810 57 aa-4.7□□□□□ -3.16
snR55snR55 MYO4P32492 1471 aa-4.7□□□□□ -3.16
snR55snR55 YJL127C-BQ3E828 52 aa-4.73□□□□□ -3.17
snR55snR55 SKI3P17883 1432 aaKnown RBP-4.73□□□□□ -3.17
snR55snR55 PAI3P01094 68 aa-4.77□□□□□ -3.17
snR55snR55 NUP170P38181 1502 aa-4.77□□□□□ -3.17
snR55snR55 PMP3P87284 55 aa-4.83□□□□□ -3.18
snR55snR55 NUP192P47054 1683 aa-4.86□□□□□ -3.19
snR55snR55 YKL023C-AQ2V2P3 75 aa-4.86□□□□□ -3.19
snR55snR55 PEP1P32319 1579 aa-4.92□□□□□ -3.2
snR55snR55 USO1P25386 1790 aa-4.93□□□□□ -3.2
snR55snR55 MON2P48563 1636 aaPredicted RBP-4.97□□□□□ -3.21
snR55snR55 CHC1P22137 1653 aaKnown RBP-5.05□□□□□ -3.22
snR55snR55 VMA9Q3E7B6 73 aa-5.05□□□□□ -3.22
snR55snR55 HOR7Q05827 59 aa-5.08□□□□□ -3.22
snR55snR55 RKR1Q04781 1562 aa-5.09□□□□□ -3.22
snR55snR55 SMX2P40204 77 aaKnown RBP-5.11□□□□□ -3.23
snR55snR55 TOM7P53507 60 aa-5.19□□□□□ -3.24
snR55snR55 MLP2P40457 1679 aa-5.2□□□□□ -3.24
snR55snR55 SPT6P23615 1451 aaKnown RBP-5.27□□□□□ -3.25
snR55snR55 YFR010W-AP0C5N0 62 aa-5.39□□□□□ -3.27
snR55snR55 NCE101Q02820 53 aa-5.84□□□□□ -3.34
snR55snR55 Q0297Q9ZZV8 51 aa-6.01□□□□□ -3.37
snR55snR55 RPL39P04650 51 aa-6.1□□□□□ -3.39
snR55snR55 YIL046W-AQ3E7Z4 54 aa-6.59□□□□□ -3.46
snR55snR55 YDR034W-BQ6Q5X2 51 aa-7.32□□□□□ -3.58
Retrieved 63 of 5,963 RNA–protein pairs in 10.1 ms