RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W Q0017Q9ZZX8 53 aa-0.93□□□□□ -2.56
SWM2YNR004W TEL1P38110 2787 aa-0.93□□□□□ -2.56
SWM2YNR004W MDN1Q12019 4910 aaKnown RBP-0.96□□□□□ -2.56
SWM2YNR004W YOR316C-AQ3E806 69 aa-1□□□□□ -2.57
SWM2YNR004W YML054C-AQ3E809 52 aa-1□□□□□ -2.57
SWM2YNR004W TY1B-DR4Q07793 1604 aa-1□□□□□ -2.57
SWM2YNR004W FIG2P25653 1609 aa-1.03□□□□□ -2.57
SWM2YNR004W YPR010C-AA5Z2X5 72 aa-1.03□□□□□ -2.57
SWM2YNR004W YOR093CQ12275 1648 aa-1.04□□□□□ -2.58
SWM2YNR004W YKL023C-AQ2V2P3 75 aa-1.05□□□□□ -2.58
SWM2YNR004W YDR034C-AP0C289 58 aa-1.06□□□□□ -2.58
SWM2YNR004W PDR5P33302 1511 aaKnown RBP-1.09□□□□□ -2.58
SWM2YNR004W THO2P53552 1597 aaKnown RBP-1.09□□□□□ -2.58
SWM2YNR004W GCN1P33892 2672 aaKnown RBP-1.1□□□□□ -2.59
SWM2YNR004W YBT1P32386 1661 aa-1.1□□□□□ -2.59
SWM2YNR004W RPL29P05747 59 aaPredicted RBP-1.11□□□□□ -2.59
SWM2YNR004W COX9P07255 59 aa-1.16□□□□□ -2.6
SWM2YNR004W YFR010W-AP0C5N0 62 aa-1.17□□□□□ -2.6
SWM2YNR004W YCF1P39109 1515 aaKnown RBP-1.17□□□□□ -2.6
SWM2YNR004W TRA1P38811 3744 aa-1.23□□□□□ -2.61
SWM2YNR004W FLO1P32768 1537 aa-1.25□□□□□ -2.61
SWM2YNR004W CDC25P04821 1589 aa-1.26□□□□□ -2.61
SWM2YNR004W CUP1-1P0CX80 61 aa-1.27□□□□□ -2.61
SWM2YNR004W CUP1-2P0CX81 61 aa-1.27□□□□□ -2.61
SWM2YNR004W NUP188P52593 1655 aaKnown RBP-1.29□□□□□ -2.62
SWM2YNR004W SSK2P53599 1579 aa-1.29□□□□□ -2.62
SWM2YNR004W CSF1Q12150 2958 aa-1.29□□□□□ -2.62
SWM2YNR004W BUD3P25558 1636 aa-1.29□□□□□ -2.62
SWM2YNR004W DDR2P89113 61 aa-1.3□□□□□ -2.62
SWM2YNR004W GCN2P15442 1659 aa-1.33□□□□□ -2.62
SWM2YNR004W YJL133C-AQ3E7A3 74 aa-1.35□□□□□ -2.63
SWM2YNR004W ATG2P53855 1592 aa-1.37□□□□□ -2.63
SWM2YNR004W USO1P25386 1790 aa-1.39□□□□□ -2.63
SWM2YNR004W STU1P38198 1513 aa-1.4□□□□□ -2.63
SWM2YNR004W YMR105W-AQ8TGS8 64 aa-1.4□□□□□ -2.63
SWM2YNR004W NUP192P47054 1683 aa-1.41□□□□□ -2.63
SWM2YNR004W SPT6P23615 1451 aaKnown RBP-1.41□□□□□ -2.63
SWM2YNR004W NUP170P38181 1502 aa-1.43□□□□□ -2.64
SWM2YNR004W YHR073W-AP0C5N7 58 aa-1.43□□□□□ -2.64
SWM2YNR004W YLR342W-AQ3E810 57 aa-1.43□□□□□ -2.64
SWM2YNR004W HIR3P47171 1648 aa-1.44□□□□□ -2.64
SWM2YNR004W IRA1P18963 3092 aa-1.44□□□□□ -2.64
SWM2YNR004W PEP1P32319 1579 aa-1.52□□□□□ -2.65
SWM2YNR004W ULS1Q08562 1619 aa-1.54□□□□□ -2.66
SWM2YNR004W NUM1Q00402 2748 aa-1.55□□□□□ -2.66
SWM2YNR004W IRA2P19158 3079 aa-1.58□□□□□ -2.66
SWM2YNR004W SMX2P40204 77 aaKnown RBP-1.6□□□□□ -2.67
SWM2YNR004W MON2P48563 1636 aaPredicted RBP-1.6□□□□□ -2.67
SWM2YNR004W RKR1Q04781 1562 aa-1.6□□□□□ -2.67
SWM2YNR004W YJL127C-BQ3E828 52 aa-1.62□□□□□ -2.67
SWM2YNR004W PMP3P87284 55 aa-1.72□□□□□ -2.68
SWM2YNR004W VPS13Q07878 3144 aa-1.73□□□□□ -2.69
SWM2YNR004W HOR7Q05827 59 aa-1.95□□□□□ -2.72
SWM2YNR004W CHC1P22137 1653 aaKnown RBP-2□□□□□ -2.73
SWM2YNR004W TOM7P53507 60 aa-2.05□□□□□ -2.74
SWM2YNR004W YLL066W-BQ8TGJ7 56 aa-2.09□□□□□ -2.74
SWM2YNR004W MLP2P40457 1679 aa-2.12□□□□□ -2.75
SWM2YNR004W TOM1Q03280 3268 aa-2.37□□□□□ -2.79
SWM2YNR004W NCE101Q02820 53 aa-2.47□□□□□ -2.8
SWM2YNR004W RPL39P04650 51 aa-2.83□□□□□ -2.86
SWM2YNR004W Q0297Q9ZZV8 51 aa-3.24□□□□□ -2.93
SWM2YNR004W YIL046W-AQ3E7Z4 54 aa-3.28□□□□□ -2.93
SWM2YNR004W YDR034W-BQ6Q5X2 51 aa-4.25□□□□□ -3.09
Retrieved 63 of 5,963 RNA–protein pairs in 9.6 ms