RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W Q0017Q9ZZX8 53 aa-0.64□□□□□ -2.51
DDR48YMR173W FIG2P25653 1609 aa-0.64□□□□□ -2.51
DDR48YMR173W TY1B-DR4Q07793 1604 aa-0.64□□□□□ -2.51
DDR48YMR173W YOR093CQ12275 1648 aa-0.64□□□□□ -2.51
DDR48YMR173W YPR010C-AA5Z2X5 72 aa-0.68□□□□□ -2.52
DDR48YMR173W YOR316C-AQ3E806 69 aa-0.68□□□□□ -2.52
DDR48YMR173W YDR034C-AP0C289 58 aa-0.7□□□□□ -2.52
DDR48YMR173W YML054C-AQ3E809 52 aa-0.7□□□□□ -2.52
DDR48YMR173W PDR5P33302 1511 aaKnown RBP-0.71□□□□□ -2.52
DDR48YMR173W YKL023C-AQ2V2P3 75 aa-0.72□□□□□ -2.52
DDR48YMR173W THO2P53552 1597 aaKnown RBP-0.73□□□□□ -2.53
DDR48YMR173W RPL29P05747 59 aaPredicted RBP-0.74□□□□□ -2.53
DDR48YMR173W YCF1P39109 1515 aaKnown RBP-0.75□□□□□ -2.53
DDR48YMR173W YFR010W-AP0C5N0 62 aa-0.77□□□□□ -2.53
DDR48YMR173W YBT1P32386 1661 aa-0.78□□□□□ -2.53
DDR48YMR173W FLO1P32768 1537 aa-0.79□□□□□ -2.54
DDR48YMR173W GCN1P33892 2672 aaKnown RBP-0.81□□□□□ -2.54
DDR48YMR173W DYN1P36022 4092 aa-0.81□□□□□ -2.54
DDR48YMR173W COX9P07255 59 aa-0.81□□□□□ -2.54
DDR48YMR173W NUP188P52593 1655 aaKnown RBP-0.84□□□□□ -2.54
DDR48YMR173W CUP1-1P0CX80 61 aa-0.85□□□□□ -2.55
DDR48YMR173W CUP1-2P0CX81 61 aa-0.85□□□□□ -2.55
DDR48YMR173W DDR2P89113 61 aa-0.87□□□□□ -2.55
DDR48YMR173W BUD3P25558 1636 aa-0.88□□□□□ -2.55
DDR48YMR173W YJL133C-AQ3E7A3 74 aa-0.89□□□□□ -2.55
DDR48YMR173W CSF1Q12150 2958 aa-0.9□□□□□ -2.55
DDR48YMR173W ATG2P53855 1592 aa-0.9□□□□□ -2.55
DDR48YMR173W STU1P38198 1513 aa-0.9□□□□□ -2.55
DDR48YMR173W MDN1Q12019 4910 aaKnown RBP-0.91□□□□□ -2.55
DDR48YMR173W SSK2P53599 1579 aa-0.91□□□□□ -2.55
DDR48YMR173W CDC25P04821 1589 aa-0.91□□□□□ -2.56
DDR48YMR173W GCN2P15442 1659 aa-0.92□□□□□ -2.56
DDR48YMR173W NUP170P38181 1502 aa-0.93□□□□□ -2.56
DDR48YMR173W YLR342W-AQ3E810 57 aa-0.93□□□□□ -2.56
DDR48YMR173W NUP192P47054 1683 aa-0.94□□□□□ -2.56
DDR48YMR173W USO1P25386 1790 aa-0.95□□□□□ -2.56
DDR48YMR173W YHR073W-AP0C5N7 58 aa-0.95□□□□□ -2.56
DDR48YMR173W YMR105W-AQ8TGS8 64 aa-0.95□□□□□ -2.56
DDR48YMR173W SPT6P23615 1451 aaKnown RBP-0.97□□□□□ -2.56
DDR48YMR173W PEP1P32319 1579 aa-0.99□□□□□ -2.57
DDR48YMR173W HIR3P47171 1648 aa-1.04□□□□□ -2.58
DDR48YMR173W IRA1P18963 3092 aa-1.05□□□□□ -2.58
DDR48YMR173W YJL127C-BQ3E828 52 aa-1.05□□□□□ -2.58
DDR48YMR173W ULS1Q08562 1619 aa-1.05□□□□□ -2.58
DDR48YMR173W RKR1Q04781 1562 aa-1.05□□□□□ -2.58
DDR48YMR173W TRA1P38811 3744 aa-1.06□□□□□ -2.58
DDR48YMR173W SMX2P40204 77 aaKnown RBP-1.07□□□□□ -2.58
DDR48YMR173W NUM1Q00402 2748 aa-1.09□□□□□ -2.58
DDR48YMR173W PMP3P87284 55 aa-1.14□□□□□ -2.59
DDR48YMR173W MON2P48563 1636 aaPredicted RBP-1.15□□□□□ -2.59
DDR48YMR173W IRA2P19158 3079 aa-1.17□□□□□ -2.6
DDR48YMR173W VPS13Q07878 3144 aa-1.3□□□□□ -2.62
DDR48YMR173W HOR7Q05827 59 aa-1.3□□□□□ -2.62
DDR48YMR173W YLL066W-BQ8TGJ7 56 aa-1.4□□□□□ -2.63
DDR48YMR173W CHC1P22137 1653 aaKnown RBP-1.41□□□□□ -2.63
DDR48YMR173W TOM7P53507 60 aa-1.41□□□□□ -2.64
DDR48YMR173W MLP2P40457 1679 aa-1.53□□□□□ -2.65
DDR48YMR173W NCE101Q02820 53 aa-1.65□□□□□ -2.67
DDR48YMR173W TOM1Q03280 3268 aa-1.94□□□□□ -2.72
DDR48YMR173W RPL39P04650 51 aa-2.01□□□□□ -2.73
DDR48YMR173W Q0297Q9ZZV8 51 aa-2.33□□□□□ -2.78
DDR48YMR173W YIL046W-AQ3E7Z4 54 aa-2.43□□□□□ -2.8
DDR48YMR173W YDR034W-BQ6Q5X2 51 aa-3.4□□□□□ -2.95
Retrieved 63 of 5,963 RNA–protein pairs in 21.2 ms