RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C TY1B-DR4Q07793 1604 aa0.07□□□□□ -2.4
NYV1YLR093C YOR072W-BQ3E832 53 aa0.07□□□□□ -2.4
NYV1YLR093C SPT6P23615 1451 aaKnown RBP0.06□□□□□ -2.4
NYV1YLR093C YOR093CQ12275 1648 aa0.03□□□□□ -2.4
NYV1YLR093C SSK2P53599 1579 aa-0.04□□□□□ -2.42
NYV1YLR093C NUP188P52593 1655 aaKnown RBP-0.05□□□□□ -2.42
NYV1YLR093C YHR050W-AQ05451 56 aa-0.05□□□□□ -2.42
NYV1YLR093C MON2P48563 1636 aaPredicted RBP-0.05□□□□□ -2.42
NYV1YLR093C USO1P25386 1790 aa-0.11□□□□□ -2.43
NYV1YLR093C BUD3P25558 1636 aa-0.11□□□□□ -2.43
NYV1YLR093C NUP192P47054 1683 aa-0.11□□□□□ -2.43
NYV1YLR093C ULS1Q08562 1619 aa-0.12□□□□□ -2.43
NYV1YLR093C YOR316C-AQ3E806 69 aa-0.13□□□□□ -2.43
NYV1YLR093C STU1P38198 1513 aa-0.14□□□□□ -2.43
NYV1YLR093C FIG2P25653 1609 aa-0.16□□□□□ -2.44
NYV1YLR093C FMP27Q06179 2628 aa-0.17□□□□□ -2.44
NYV1YLR093C PEP1P32319 1579 aa-0.18□□□□□ -2.44
NYV1YLR093C TOR2P32600 2474 aaKnown RBP-0.18□□□□□ -2.44
NYV1YLR093C RKR1Q04781 1562 aa-0.19□□□□□ -2.44
NYV1YLR093C YDR034C-AP0C289 58 aa-0.2□□□□□ -2.44
NYV1YLR093C NUP170P38181 1502 aa-0.2□□□□□ -2.44
NYV1YLR093C YPR117WQ06116 2489 aa-0.2□□□□□ -2.44
NYV1YLR093C THO2P53552 1597 aaKnown RBP-0.2□□□□□ -2.44
NYV1YLR093C ATG2P53855 1592 aa-0.2□□□□□ -2.44
NYV1YLR093C YJL133C-AQ3E7A3 74 aa-0.22□□□□□ -2.44
NYV1YLR093C GCN2P15442 1659 aa-0.22□□□□□ -2.44
NYV1YLR093C MEC1P38111 2368 aa-0.23□□□□□ -2.45
NYV1YLR093C FLO1P32768 1537 aa-0.23□□□□□ -2.45
NYV1YLR093C HIR3P47171 1648 aa-0.23□□□□□ -2.45
NYV1YLR093C RPL29P05747 59 aaPredicted RBP-0.25□□□□□ -2.45
NYV1YLR093C COX9P07255 59 aa-0.25□□□□□ -2.45
NYV1YLR093C DDR2P89113 61 aa-0.25□□□□□ -2.45
NYV1YLR093C YLR342W-AQ3E810 57 aa-0.25□□□□□ -2.45
NYV1YLR093C Q0017Q9ZZX8 53 aa-0.29□□□□□ -2.46
NYV1YLR093C YML054C-AQ3E809 52 aa-0.33□□□□□ -2.46
NYV1YLR093C DYN1P36022 4092 aa-0.37□□□□□ -2.47
NYV1YLR093C TEL1P38110 2787 aa-0.38□□□□□ -2.47
NYV1YLR093C YHR073W-AP0C5N7 58 aa-0.41□□□□□ -2.48
NYV1YLR093C SMX2P40204 77 aaKnown RBP-0.44□□□□□ -2.48
NYV1YLR093C YJL127C-BQ3E828 52 aa-0.44□□□□□ -2.48
NYV1YLR093C GCN1P33892 2672 aaKnown RBP-0.5□□□□□ -2.49
NYV1YLR093C CSF1Q12150 2958 aa-0.56□□□□□ -2.5
NYV1YLR093C MDN1Q12019 4910 aaKnown RBP-0.63□□□□□ -2.51
NYV1YLR093C CUP1-1P0CX80 61 aa-0.63□□□□□ -2.51
NYV1YLR093C CUP1-2P0CX81 61 aa-0.63□□□□□ -2.51
NYV1YLR093C PMP3P87284 55 aa-0.64□□□□□ -2.51
NYV1YLR093C TOM7P53507 60 aa-0.65□□□□□ -2.51
NYV1YLR093C TRA1P38811 3744 aa-0.66□□□□□ -2.52
NYV1YLR093C CHC1P22137 1653 aaKnown RBP-0.67□□□□□ -2.52
NYV1YLR093C MLP2P40457 1679 aa-0.7□□□□□ -2.52
NYV1YLR093C IRA1P18963 3092 aa-0.71□□□□□ -2.52
NYV1YLR093C YMR105W-AQ8TGS8 64 aa-0.73□□□□□ -2.53
NYV1YLR093C HOR7Q05827 59 aa-0.77□□□□□ -2.53
NYV1YLR093C NUM1Q00402 2748 aa-0.83□□□□□ -2.54
NYV1YLR093C IRA2P19158 3079 aa-0.87□□□□□ -2.55
NYV1YLR093C VPS13Q07878 3144 aa-1□□□□□ -2.57
NYV1YLR093C YLL066W-BQ8TGJ7 56 aa-1□□□□□ -2.57
NYV1YLR093C NCE101Q02820 53 aa-1.06□□□□□ -2.58
NYV1YLR093C RPL39P04650 51 aa-1.46□□□□□ -2.64
NYV1YLR093C TOM1Q03280 3268 aa-1.6□□□□□ -2.66
NYV1YLR093C YIL046W-AQ3E7Z4 54 aa-1.91□□□□□ -2.72
NYV1YLR093C Q0297Q9ZZV8 51 aa-2□□□□□ -2.73
NYV1YLR093C YDR034W-BQ6Q5X2 51 aa-2.87□□□□□ -2.87
Retrieved 63 of 5,963 RNA–protein pairs in 9.7 ms