RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YOL166W-AQ8TGJ1 51 aa-0.9□□□□□ -2.55
VAB2YEL005C DNF1P32660 1571 aa-0.91□□□□□ -2.56
VAB2YEL005C VPS13Q07878 3144 aa-0.92□□□□□ -2.56
VAB2YEL005C TCB3Q03640 1545 aaKnown RBP-0.94□□□□□ -2.56
VAB2YEL005C MYO4P32492 1471 aa-0.98□□□□□ -2.57
VAB2YEL005C TRA1P38811 3744 aa-1□□□□□ -2.57
VAB2YEL005C SNQ2P32568 1501 aaKnown RBP-1.03□□□□□ -2.57
VAB2YEL005C TY1B-DR4Q07793 1604 aa-1.05□□□□□ -2.58
VAB2YEL005C TOM1Q03280 3268 aa-1.07□□□□□ -2.58
VAB2YEL005C CUP1-1P0CX80 61 aa-1.08□□□□□ -2.58
VAB2YEL005C CUP1-2P0CX81 61 aa-1.08□□□□□ -2.58
VAB2YEL005C YOR093CQ12275 1648 aa-1.11□□□□□ -2.59
VAB2YEL005C FIG2P25653 1609 aa-1.12□□□□□ -2.59
VAB2YEL005C VMA9Q3E7B6 73 aa-1.18□□□□□ -2.6
VAB2YEL005C YOR192C-CQ3E736 78 aa-1.21□□□□□ -2.6
VAB2YEL005C THO2P53552 1597 aaKnown RBP-1.24□□□□□ -2.61
VAB2YEL005C YPR010C-AA5Z2X5 72 aa-1.26□□□□□ -2.61
VAB2YEL005C PDR5P33302 1511 aaKnown RBP-1.27□□□□□ -2.61
VAB2YEL005C YCF1P39109 1515 aaKnown RBP-1.27□□□□□ -2.61
VAB2YEL005C YKL023C-AQ2V2P3 75 aa-1.28□□□□□ -2.61
VAB2YEL005C Q0017Q9ZZX8 53 aa-1.28□□□□□ -2.61
VAB2YEL005C YOR316C-AQ3E806 69 aa-1.29□□□□□ -2.62
VAB2YEL005C YBT1P32386 1661 aa-1.32□□□□□ -2.62
VAB2YEL005C YMR105W-AQ8TGS8 64 aa-1.34□□□□□ -2.62
VAB2YEL005C YDR034C-AP0C289 58 aa-1.37□□□□□ -2.63
VAB2YEL005C YFR010W-AP0C5N0 62 aa-1.37□□□□□ -2.63
VAB2YEL005C YML054C-AQ3E809 52 aa-1.4□□□□□ -2.63
VAB2YEL005C RPL29P05747 59 aaPredicted RBP-1.41□□□□□ -2.64
VAB2YEL005C FLO1P32768 1537 aa-1.42□□□□□ -2.64
VAB2YEL005C NUP188P52593 1655 aaKnown RBP-1.42□□□□□ -2.64
VAB2YEL005C BUD3P25558 1636 aa-1.47□□□□□ -2.64
VAB2YEL005C CDC25P04821 1589 aa-1.51□□□□□ -2.65
VAB2YEL005C SSK2P53599 1579 aa-1.51□□□□□ -2.65
VAB2YEL005C YHR073W-AP0C5N7 58 aa-1.55□□□□□ -2.66
VAB2YEL005C ATG2P53855 1592 aa-1.56□□□□□ -2.66
VAB2YEL005C ULS1Q08562 1619 aa-1.58□□□□□ -2.66
VAB2YEL005C COX9P07255 59 aa-1.59□□□□□ -2.66
VAB2YEL005C STU1P38198 1513 aa-1.6□□□□□ -2.67
VAB2YEL005C GCN2P15442 1659 aa-1.61□□□□□ -2.67
VAB2YEL005C NUP192P47054 1683 aa-1.62□□□□□ -2.67
VAB2YEL005C DDR2P89113 61 aa-1.63□□□□□ -2.67
VAB2YEL005C YJL133C-AQ3E7A3 74 aa-1.63□□□□□ -2.67
VAB2YEL005C NUP170P38181 1502 aa-1.63□□□□□ -2.67
VAB2YEL005C USO1P25386 1790 aa-1.64□□□□□ -2.67
VAB2YEL005C SPT6P23615 1451 aaKnown RBP-1.65□□□□□ -2.67
VAB2YEL005C YLL066W-BQ8TGJ7 56 aa-1.7□□□□□ -2.68
VAB2YEL005C PEP1P32319 1579 aa-1.72□□□□□ -2.69
VAB2YEL005C YLR342W-AQ3E810 57 aa-1.74□□□□□ -2.69
VAB2YEL005C HIR3P47171 1648 aa-1.76□□□□□ -2.69
VAB2YEL005C RKR1Q04781 1562 aa-1.81□□□□□ -2.7
VAB2YEL005C YJL127C-BQ3E828 52 aa-1.84□□□□□ -2.7
VAB2YEL005C TOM7P53507 60 aa-1.9□□□□□ -2.71
VAB2YEL005C PMP3P87284 55 aa-1.9□□□□□ -2.71
VAB2YEL005C MON2P48563 1636 aaPredicted RBP-1.91□□□□□ -2.72
VAB2YEL005C SMX2P40204 77 aaKnown RBP-1.97□□□□□ -2.72
VAB2YEL005C CHC1P22137 1653 aaKnown RBP-1.97□□□□□ -2.73
VAB2YEL005C Q0297Q9ZZV8 51 aa-1.98□□□□□ -2.73
VAB2YEL005C HOR7Q05827 59 aa-1.99□□□□□ -2.73
VAB2YEL005C MLP2P40457 1679 aa-2.07□□□□□ -2.74
VAB2YEL005C YIL046W-AQ3E7Z4 54 aa-2.12□□□□□ -2.75
VAB2YEL005C YDR034W-BQ6Q5X2 51 aa-2.15□□□□□ -2.75
VAB2YEL005C RPL39P04650 51 aa-2.22□□□□□ -2.76
VAB2YEL005C NCE101Q02820 53 aa-2.24□□□□□ -2.77
Retrieved 63 of 5,963 RNA–protein pairs in 12 ms