RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W CUP1-1P0CX80 61 aa-0.92□□□□□ -2.56
LCD1YDR499W CUP1-2P0CX81 61 aa-0.92□□□□□ -2.56
LCD1YDR499W YIL102C-AQ2V2P5 75 aa-0.92□□□□□ -2.56
LCD1YDR499W FIG2P25653 1609 aa-0.93□□□□□ -2.56
LCD1YDR499W IRA1P18963 3092 aa-0.94□□□□□ -2.56
LCD1YDR499W TCB3Q03640 1545 aaKnown RBP-0.95□□□□□ -2.56
LCD1YDR499W TY1B-DR4Q07793 1604 aa-0.95□□□□□ -2.56
LCD1YDR499W YOR093CQ12275 1648 aa-0.98□□□□□ -2.57
LCD1YDR499W MYO4P32492 1471 aa-0.98□□□□□ -2.57
LCD1YDR499W THO2P53552 1597 aaKnown RBP-1□□□□□ -2.57
LCD1YDR499W YOR192C-CQ3E736 78 aa-1.02□□□□□ -2.57
LCD1YDR499W Q0017Q9ZZX8 53 aa-1.02□□□□□ -2.57
LCD1YDR499W IRA2P19158 3079 aa-1.06□□□□□ -2.58
LCD1YDR499W YOR316C-AQ3E806 69 aa-1.08□□□□□ -2.58
LCD1YDR499W PDR5P33302 1511 aaKnown RBP-1.08□□□□□ -2.58
LCD1YDR499W YPR010C-AA5Z2X5 72 aa-1.08□□□□□ -2.58
LCD1YDR499W YDR034C-AP0C289 58 aa-1.09□□□□□ -2.58
LCD1YDR499W YCF1P39109 1515 aaKnown RBP-1.1□□□□□ -2.59
LCD1YDR499W VMA9Q3E7B6 73 aa-1.11□□□□□ -2.59
LCD1YDR499W YBT1P32386 1661 aa-1.11□□□□□ -2.59
LCD1YDR499W RPL29P05747 59 aaPredicted RBP-1.12□□□□□ -2.59
LCD1YDR499W YML054C-AQ3E809 52 aa-1.13□□□□□ -2.59
LCD1YDR499W FLO1P32768 1537 aa-1.13□□□□□ -2.59
LCD1YDR499W YMR105W-AQ8TGS8 64 aa-1.14□□□□□ -2.59
LCD1YDR499W TRA1P38811 3744 aa-1.14□□□□□ -2.59
LCD1YDR499W YKL023C-AQ2V2P3 75 aa-1.16□□□□□ -2.6
LCD1YDR499W NUP188P52593 1655 aaKnown RBP-1.18□□□□□ -2.6
LCD1YDR499W SSK2P53599 1579 aa-1.21□□□□□ -2.6
LCD1YDR499W YFR010W-AP0C5N0 62 aa-1.22□□□□□ -2.6
LCD1YDR499W BUD3P25558 1636 aa-1.23□□□□□ -2.61
LCD1YDR499W VPS13Q07878 3144 aa-1.23□□□□□ -2.61
LCD1YDR499W ATG2P53855 1592 aa-1.28□□□□□ -2.61
LCD1YDR499W GCN2P15442 1659 aa-1.28□□□□□ -2.61
LCD1YDR499W CDC25P04821 1589 aa-1.28□□□□□ -2.61
LCD1YDR499W TOM1Q03280 3268 aa-1.28□□□□□ -2.61
LCD1YDR499W STU1P38198 1513 aa-1.29□□□□□ -2.62
LCD1YDR499W DDR2P89113 61 aa-1.31□□□□□ -2.62
LCD1YDR499W YJL133C-AQ3E7A3 74 aa-1.31□□□□□ -2.62
LCD1YDR499W COX9P07255 59 aa-1.32□□□□□ -2.62
LCD1YDR499W NUP192P47054 1683 aa-1.33□□□□□ -2.62
LCD1YDR499W NUP170P38181 1502 aa-1.34□□□□□ -2.62
LCD1YDR499W USO1P25386 1790 aa-1.34□□□□□ -2.62
LCD1YDR499W ULS1Q08562 1619 aa-1.36□□□□□ -2.63
LCD1YDR499W YHR073W-AP0C5N7 58 aa-1.37□□□□□ -2.63
LCD1YDR499W YLR342W-AQ3E810 57 aa-1.39□□□□□ -2.63
LCD1YDR499W SPT6P23615 1451 aaKnown RBP-1.39□□□□□ -2.63
LCD1YDR499W HIR3P47171 1648 aa-1.4□□□□□ -2.63
LCD1YDR499W PEP1P32319 1579 aa-1.4□□□□□ -2.63
LCD1YDR499W RKR1Q04781 1562 aa-1.48□□□□□ -2.65
LCD1YDR499W YJL127C-BQ3E828 52 aa-1.52□□□□□ -2.65
LCD1YDR499W YLL066W-BQ8TGJ7 56 aa-1.55□□□□□ -2.66
LCD1YDR499W MON2P48563 1636 aaPredicted RBP-1.57□□□□□ -2.66
LCD1YDR499W SMX2P40204 77 aaKnown RBP-1.6□□□□□ -2.67
LCD1YDR499W PMP3P87284 55 aa-1.66□□□□□ -2.67
LCD1YDR499W CHC1P22137 1653 aaKnown RBP-1.72□□□□□ -2.69
LCD1YDR499W TOM7P53507 60 aa-1.74□□□□□ -2.69
LCD1YDR499W MLP2P40457 1679 aa-1.76□□□□□ -2.69
LCD1YDR499W HOR7Q05827 59 aa-1.76□□□□□ -2.69
LCD1YDR499W Q0297Q9ZZV8 51 aa-1.83□□□□□ -2.7
LCD1YDR499W YIL046W-AQ3E7Z4 54 aa-2□□□□□ -2.73
LCD1YDR499W NCE101Q02820 53 aa-2.05□□□□□ -2.74
LCD1YDR499W YDR034W-BQ6Q5X2 51 aa-2.05□□□□□ -2.74
LCD1YDR499W RPL39P04650 51 aa-2.06□□□□□ -2.74
Retrieved 63 of 5,963 RNA–protein pairs in 11.4 ms