RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C CSF1Q12150 2958 aa-1.53□□□□□ -2.66
RUB1YDR139C YOR093CQ12275 1648 aa-1.54□□□□□ -2.66
RUB1YDR139C THO2P53552 1597 aaKnown RBP-1.54□□□□□ -2.66
RUB1YDR139C SKI3P17883 1432 aaKnown RBP-1.56□□□□□ -2.66
RUB1YDR139C PAI3P01094 68 aa-1.57□□□□□ -2.66
RUB1YDR139C SCC2Q04002 1493 aa-1.57□□□□□ -2.66
RUB1YDR139C YIL102C-AQ2V2P5 75 aa-1.58□□□□□ -2.66
RUB1YDR139C TCB3Q03640 1545 aaKnown RBP-1.61□□□□□ -2.67
RUB1YDR139C YML054C-AQ3E809 52 aa-1.63□□□□□ -2.67
RUB1YDR139C CUP1-1P0CX80 61 aa-1.64□□□□□ -2.67
RUB1YDR139C CUP1-2P0CX81 61 aa-1.64□□□□□ -2.67
RUB1YDR139C YOR316C-AQ3E806 69 aa-1.65□□□□□ -2.67
RUB1YDR139C PDR5P33302 1511 aaKnown RBP-1.67□□□□□ -2.68
RUB1YDR139C YDR034C-AP0C289 58 aa-1.68□□□□□ -2.68
RUB1YDR139C MYO4P32492 1471 aa-1.69□□□□□ -2.68
RUB1YDR139C YBT1P32386 1661 aa-1.69□□□□□ -2.68
RUB1YDR139C RPL29P05747 59 aaPredicted RBP-1.7□□□□□ -2.68
RUB1YDR139C FLO1P32768 1537 aa-1.74□□□□□ -2.69
RUB1YDR139C YPR010C-AA5Z2X5 72 aa-1.76□□□□□ -2.69
RUB1YDR139C YCF1P39109 1515 aaKnown RBP-1.76□□□□□ -2.69
RUB1YDR139C NUP188P52593 1655 aaKnown RBP-1.8□□□□□ -2.7
RUB1YDR139C SSK2P53599 1579 aa-1.81□□□□□ -2.7
RUB1YDR139C IRA1P18963 3092 aa-1.82□□□□□ -2.7
RUB1YDR139C TRA1P38811 3744 aa-1.83□□□□□ -2.7
RUB1YDR139C GCN2P15442 1659 aa-1.86□□□□□ -2.71
RUB1YDR139C VMA9Q3E7B6 73 aa-1.87□□□□□ -2.71
RUB1YDR139C YKL023C-AQ2V2P3 75 aa-1.89□□□□□ -2.71
RUB1YDR139C BUD3P25558 1636 aa-1.9□□□□□ -2.71
RUB1YDR139C YMR105W-AQ8TGS8 64 aa-1.92□□□□□ -2.72
RUB1YDR139C STU1P38198 1513 aa-1.96□□□□□ -2.72
RUB1YDR139C ATG2P53855 1592 aa-1.97□□□□□ -2.72
RUB1YDR139C COX9P07255 59 aa-1.97□□□□□ -2.72
RUB1YDR139C CDC25P04821 1589 aa-1.98□□□□□ -2.73
RUB1YDR139C YJL133C-AQ3E7A3 74 aa-1.98□□□□□ -2.73
RUB1YDR139C USO1P25386 1790 aa-1.99□□□□□ -2.73
RUB1YDR139C DDR2P89113 61 aa-1.99□□□□□ -2.73
RUB1YDR139C YFR010W-AP0C5N0 62 aa-2□□□□□ -2.73
RUB1YDR139C IRA2P19158 3079 aa-2.02□□□□□ -2.73
RUB1YDR139C YHR073W-AP0C5N7 58 aa-2.03□□□□□ -2.73
RUB1YDR139C HIR3P47171 1648 aa-2.05□□□□□ -2.74
RUB1YDR139C NUP192P47054 1683 aa-2.06□□□□□ -2.74
RUB1YDR139C NUP170P38181 1502 aa-2.07□□□□□ -2.74
RUB1YDR139C ULS1Q08562 1619 aa-2.13□□□□□ -2.75
RUB1YDR139C YLR342W-AQ3E810 57 aa-2.16□□□□□ -2.76
RUB1YDR139C PEP1P32319 1579 aa-2.16□□□□□ -2.76
RUB1YDR139C SPT6P23615 1451 aaKnown RBP-2.2□□□□□ -2.76
RUB1YDR139C VPS13Q07878 3144 aa-2.21□□□□□ -2.76
RUB1YDR139C RKR1Q04781 1562 aa-2.31□□□□□ -2.78
RUB1YDR139C YJL127C-BQ3E828 52 aa-2.31□□□□□ -2.78
RUB1YDR139C TOM1Q03280 3268 aa-2.32□□□□□ -2.78
RUB1YDR139C SMX2P40204 77 aaKnown RBP-2.4□□□□□ -2.79
RUB1YDR139C PMP3P87284 55 aa-2.42□□□□□ -2.8
RUB1YDR139C MON2P48563 1636 aaPredicted RBP-2.42□□□□□ -2.8
RUB1YDR139C HOR7Q05827 59 aa-2.62□□□□□ -2.83
RUB1YDR139C CHC1P22137 1653 aaKnown RBP-2.63□□□□□ -2.83
RUB1YDR139C YLL066W-BQ8TGJ7 56 aa-2.64□□□□□ -2.83
RUB1YDR139C MLP2P40457 1679 aa-2.79□□□□□ -2.86
RUB1YDR139C TOM7P53507 60 aa-2.8□□□□□ -2.86
RUB1YDR139C NCE101Q02820 53 aa-3.21□□□□□ -2.92
RUB1YDR139C RPL39P04650 51 aa-3.57□□□□□ -2.98
RUB1YDR139C Q0297Q9ZZV8 51 aa-3.91□□□□□ -3.04
RUB1YDR139C YIL046W-AQ3E7Z4 54 aa-4.05□□□□□ -3.06
RUB1YDR139C YDR034W-BQ6Q5X2 51 aa-4.3□□□□□ -3.1
Retrieved 63 of 5,963 RNA–protein pairs in 9.6 ms