RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C TOR2P32600 2474 aaKnown RBP-0.28□□□□□ -2.45
RPB5YBR154C YOR093CQ12275 1648 aa-0.29□□□□□ -2.46
RPB5YBR154C GCN1P33892 2672 aaKnown RBP-0.29□□□□□ -2.46
RPB5YBR154C YCF1P39109 1515 aaKnown RBP-0.29□□□□□ -2.46
RPB5YBR154C YPR010C-AA5Z2X5 72 aa-0.31□□□□□ -2.46
RPB5YBR154C YBT1P32386 1661 aa-0.31□□□□□ -2.46
RPB5YBR154C PDR5P33302 1511 aaKnown RBP-0.32□□□□□ -2.46
RPB5YBR154C TEL1P38110 2787 aa-0.33□□□□□ -2.46
RPB5YBR154C YPR117WQ06116 2489 aa-0.33□□□□□ -2.46
RPB5YBR154C DYN1P36022 4092 aa-0.34□□□□□ -2.46
RPB5YBR154C CSF1Q12150 2958 aa-0.36□□□□□ -2.47
RPB5YBR154C CDC25P04821 1589 aa-0.36□□□□□ -2.47
RPB5YBR154C MEC1P38111 2368 aa-0.39□□□□□ -2.47
RPB5YBR154C FIG2P25653 1609 aa-0.39□□□□□ -2.47
RPB5YBR154C YOR316C-AQ3E806 69 aa-0.41□□□□□ -2.48
RPB5YBR154C SPT6P23615 1451 aaKnown RBP-0.42□□□□□ -2.48
RPB5YBR154C NUM1Q00402 2748 aa-0.43□□□□□ -2.48
RPB5YBR154C IRA1P18963 3092 aa-0.43□□□□□ -2.48
RPB5YBR154C NUP188P52593 1655 aaKnown RBP-0.43□□□□□ -2.48
RPB5YBR154C THO2P53552 1597 aaKnown RBP-0.44□□□□□ -2.48
RPB5YBR154C SSK2P53599 1579 aa-0.44□□□□□ -2.48
RPB5YBR154C BUD3P25558 1636 aa-0.45□□□□□ -2.48
RPB5YBR154C YDR034C-AP0C289 58 aa-0.47□□□□□ -2.48
RPB5YBR154C TRA1P38811 3744 aa-0.49□□□□□ -2.49
RPB5YBR154C Q0017Q9ZZX8 53 aa-0.49□□□□□ -2.49
RPB5YBR154C NUP192P47054 1683 aa-0.49□□□□□ -2.49
RPB5YBR154C USO1P25386 1790 aa-0.5□□□□□ -2.49
RPB5YBR154C FLO1P32768 1537 aa-0.5□□□□□ -2.49
RPB5YBR154C IRA2P19158 3079 aa-0.5□□□□□ -2.49
RPB5YBR154C RPL29P05747 59 aaPredicted RBP-0.51□□□□□ -2.49
RPB5YBR154C STU1P38198 1513 aa-0.51□□□□□ -2.49
RPB5YBR154C ATG2P53855 1592 aa-0.53□□□□□ -2.49
RPB5YBR154C NUP170P38181 1502 aa-0.54□□□□□ -2.5
RPB5YBR154C TOM1Q03280 3268 aa-0.54□□□□□ -2.5
RPB5YBR154C MON2P48563 1636 aaPredicted RBP-0.54□□□□□ -2.5
RPB5YBR154C ULS1Q08562 1619 aa-0.55□□□□□ -2.5
RPB5YBR154C COX9P07255 59 aa-0.55□□□□□ -2.5
RPB5YBR154C YML054C-AQ3E809 52 aa-0.55□□□□□ -2.5
RPB5YBR154C VPS13Q07878 3144 aa-0.55□□□□□ -2.5
RPB5YBR154C GCN2P15442 1659 aa-0.56□□□□□ -2.5
RPB5YBR154C DDR2P89113 61 aa-0.57□□□□□ -2.5
RPB5YBR154C PEP1P32319 1579 aa-0.57□□□□□ -2.5
RPB5YBR154C YJL133C-AQ3E7A3 74 aa-0.58□□□□□ -2.5
RPB5YBR154C RKR1Q04781 1562 aa-0.59□□□□□ -2.5
RPB5YBR154C HIR3P47171 1648 aa-0.6□□□□□ -2.5
RPB5YBR154C YLR342W-AQ3E810 57 aa-0.61□□□□□ -2.51
RPB5YBR154C YHR073W-AP0C5N7 58 aa-0.69□□□□□ -2.52
RPB5YBR154C CUP1-1P0CX80 61 aa-0.73□□□□□ -2.53
RPB5YBR154C CUP1-2P0CX81 61 aa-0.73□□□□□ -2.53
RPB5YBR154C YJL127C-BQ3E828 52 aa-0.77□□□□□ -2.53
RPB5YBR154C SMX2P40204 77 aaKnown RBP-0.78□□□□□ -2.53
RPB5YBR154C YMR105W-AQ8TGS8 64 aa-0.88□□□□□ -2.55
RPB5YBR154C PMP3P87284 55 aa-0.93□□□□□ -2.56
RPB5YBR154C CHC1P22137 1653 aaKnown RBP-1.04□□□□□ -2.58
RPB5YBR154C HOR7Q05827 59 aa-1.05□□□□□ -2.58
RPB5YBR154C TOM7P53507 60 aa-1.06□□□□□ -2.58
RPB5YBR154C YLL066W-BQ8TGJ7 56 aa-1.07□□□□□ -2.58
RPB5YBR154C MLP2P40457 1679 aa-1.1□□□□□ -2.58
RPB5YBR154C YDR034W-BQ6Q5X2 51 aa-1.11□□□□□ -2.59
RPB5YBR154C Q0297Q9ZZV8 51 aa-1.13□□□□□ -2.59
RPB5YBR154C YIL046W-AQ3E7Z4 54 aa-1.2□□□□□ -2.6
RPB5YBR154C RPL39P04650 51 aa-1.26□□□□□ -2.61
RPB5YBR154C NCE101Q02820 53 aa-1.38□□□□□ -2.63
Retrieved 63 of 5,963 RNA–protein pairs in 5.8 ms