RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 MON1BQ7L1V2 547 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 DNAJB7Q7Z6W7 309 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-218ENST00000641491 PHLDB2Q86SQ0 1253 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 TMEM110Q86TL2 294 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 MON1AQ86VX9 555 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 SCUBE3Q8IX30 993 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 C3orf20Q8ND61 904 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 NECAB3Q96P71 396 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-218ENST00000641491 ALS2CR12Q96Q35 445 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 ISCUQ9H1K1 167 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 CRISPLD1Q9H336 500 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 ATXN3LQ9H3M9 355 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 TRPC7Q9HCX4 862 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 METTL5Q9NRN9 209 aaKnown RBP13.59□□□□□ -0.23
PHGDH-218ENST00000641491 OLA1Q9NTK5 396 aaKnown RBP13.59□□□□□ -0.23
PHGDH-218ENST00000641491 TAS2R14Q9NYV8 317 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 UVRAGQ9P2Y5 699 aa13.59□□□□□ -0.23
PHGDH-218ENST00000641491 COL4A4P53420 1690 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-218ENST00000641491 ATMINO43313 823 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-218ENST00000641491 RFPL2O75678 378 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 LTFP02788 710 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 POU2F2P09086 479 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 RRM1P23921 792 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 GABRR2P28476 465 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 SDC4P31431 198 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 GBP1P32455 592 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 SCNN1AP37088 669 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 SSR1P43307 286 aaKnown RBP13.58□□□□□ -0.24
PHGDH-218ENST00000641491 GABRB2P47870 512 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 TAF10Q12962 218 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 ASTE1Q2TB18 679 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-218ENST00000641491 ODF2Q5BJF6 829 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 RAB41Q5JT25 222 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 ATAT1Q5SQI0 421 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 ANKRD54Q6NXT1 300 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 XYLT1Q86Y38 959 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 TMEM139Q8IV31 216 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 ZMIZ2Q8NF64 920 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 CMASQ8NFW8 434 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-218ENST00000641491 SCAMP5Q8TAC9 235 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 ZNF564Q8TBZ8 553 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-218ENST00000641491 RNF34Q969K3 372 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 TRMT2BQ96GJ1 504 aaKnown RBP13.58□□□□□ -0.24
PHGDH-218ENST00000641491 MCEEQ96PE7 176 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 SYT11Q9BT88 431 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 NUP85Q9BW27 656 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 APOL5Q9BWW9 433 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 THAP2Q9H0W7 228 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 FAM204AQ9H8W3 233 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 POPDC2Q9HBU9 364 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 AVENQ9NQS1 362 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-218ENST00000641491 ABCC13Q9NSE7 274 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 ASNSD1Q9NWL6 643 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 RRN3Q9NYV6 651 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 GMIPQ9P107 970 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 ZMYM5Q9UJ78 669 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 PAXBP1Q9Y5B6 917 aa13.58□□□□□ -0.24
PHGDH-218ENST00000641491 MYO1FO00160 1098 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 DAB1O75553 588 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 GRAP2O75791 330 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 LCA5LO95447 670 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 VNN2O95498 520 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 NCAM1P13591 858 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 POU3F3P20264 500 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-218ENST00000641491 DDX6P26196 483 aaKnown RBP eCLIP13.57□□□□□ -0.24
PHGDH-218ENST00000641491 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.24
PHGDH-218ENST00000641491 MTHFRP42898 656 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 DAOAP59103 153 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 YWHAZP63104 245 aaKnown RBP13.57□□□□□ -0.24
PHGDH-218ENST00000641491 MTMR3Q13615 1198 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 C2CD6Q53TS8 623 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 C10orf120Q5SQS8 335 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 HECTD3Q5T447 861 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 GPRIN1Q7Z2K8 1008 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 SCML4Q8N228 414 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 WDTC1Q8N5D0 677 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-218ENST00000641491 RFFLQ8WZ73 363 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 PABPC5Q96DU9 382 aaKnown RBP13.57□□□□□ -0.24
PHGDH-218ENST00000641491 EPHX3Q9H6B9 360 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 TMEM51Q9NW97 253 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.57□□□□□ -0.24
PHGDH-218ENST00000641491 CYTH4Q9UIA0 394 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 ANAPC7Q9UJX3 599 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 FAM50BQ9Y247 325 aa13.57□□□□□ -0.24
PHGDH-218ENST00000641491 MRPS23Q9Y3D9 190 aaKnown RBP13.57□□□□□ -0.24
PHGDH-218ENST00000641491 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.57□□□□□ -0.24
PHGDH-218ENST00000641491 MUC6Q6W4X9 2439 aa13.56□□□□□ -0.24
PHGDH-218ENST00000641491 TRAV19A0A0A6YYK7 116 aa13.56□□□□□ -0.24
PHGDH-218ENST00000641491 A0A1W2PQH9 124 aa13.56□□□□□ -0.24
PHGDH-218ENST00000641491 HHLA1C9JL84 531 aa13.56□□□□□ -0.24
PHGDH-218ENST00000641491 TNFRSF10BO14763 440 aa13.56□□□□□ -0.24
PHGDH-218ENST00000641491 PAPSS1O43252 624 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-218ENST00000641491 RNF8O76064 485 aa13.56□□□□□ -0.24
PHGDH-218ENST00000641491 RHOP08100 348 aa13.56□□□□□ -0.24
PHGDH-218ENST00000641491 RARGP13631 454 aa13.56□□□□□ -0.24
PHGDH-218ENST00000641491 GPD1P21695 349 aa13.56□□□□□ -0.24
PHGDH-218ENST00000641491 PSMA2P25787 234 aa13.56□□□□□ -0.24
PHGDH-218ENST00000641491 DEKP35659 375 aaKnown RBP13.56□□□□□ -0.24
PHGDH-218ENST00000641491 AVPR1AP37288 418 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms