RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 GPNMBQ14956 572 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 KCTD19Q17RG1 926 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-216ENST00000641375 SPDYCQ5MJ68 293 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 ZDHHC24Q6UX98 284 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 GSTA5Q7RTV2 222 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 ANKRD33Q7Z3H0 272 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 TMC3Q7Z5M5 1100 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 FBXO25Q8TCJ0 367 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 ART4Q93070 314 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 NKD2Q969F2 451 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-216ENST00000641375 MYLPFQ96A32 169 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 SNF8Q96H20 258 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 SMOQ99835 787 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 CSNK1G1Q9HCP0 422 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 CNGB3Q9NQW8 809 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 DNPEPQ9ULA0 475 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 ZNF148Q9UQR1 794 aa17.17■□□□□ 0.34
PHGDH-216ENST00000641375 OPA1O60313 960 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 CD48P09326 243 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 VCPP55072 806 aaKnown RBP17.16■□□□□ 0.34
PHGDH-216ENST00000641375 TFDP2Q14188 446 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 KRT81Q14533 505 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 SLC25A52Q3SY17 297 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 RAB41Q5JT25 222 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 RFX6Q8HWS3 928 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 IQCKQ8N0W5 287 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 GOLGA6L1Q8N7Z2 621 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 BBOF1Q8ND07 529 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 FAM118BQ9BPY3 351 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 STAP1Q9ULZ2 295 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 NEU2Q9Y3R4 380 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 AGPSO00116 658 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 HOXA2O43364 376 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 ITGAVP06756 1048 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 ATF2P15336 505 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 NOS2P35228 1153 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 OR1G1P47890 313 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 ARSEP51690 589 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 HNRNPH2P55795 449 aaKnown RBP17.16■□□□□ 0.34
PHGDH-216ENST00000641375 CAV1Q03135 178 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 DHX9Q08211 1270 aaKnown RBP17.16■□□□□ 0.34
PHGDH-216ENST00000641375 RAB6CQ53S08 254 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 ERMARDQ5T6L9 678 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 RAB6CQ9H0N0 254 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 POPDC2Q9HBU9 364 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 LRFN2Q9ULH4 789 aa17.16■□□□□ 0.34
PHGDH-216ENST00000641375 DCDC2CA8MYV0 355 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 ZNF487B1APH4 448 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 APOC4-APOC2K7ER74 178 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 PPFIA2O75334 1257 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 SYF2O95926 243 aaKnown RBP17.15■□□□□ 0.34
PHGDH-216ENST00000641375 APOC2P02655 101 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 ADCY8P40145 1251 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 DYNLT1P63172 113 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 DPYSL3Q14195 570 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 OASLQ15646 514 aaKnown RBP17.15■□□□□ 0.34
PHGDH-216ENST00000641375 SLC39A5Q6ZMH5 540 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 DEFB106AQ8N104 65 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 SLC35B2Q8TB61 432 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 ZIM3Q96PE6 472 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 KCNK16Q96T55 309 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 PKMYT1Q99640 499 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 HIPK3Q9H422 1215 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 PTPRDP23468 1912 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 TTC3P53804 2025 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 B4GALT3O60512 393 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 HSD17B3P37058 310 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 NDUFV1P49821 464 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 DCAF6Q58WW2 860 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 C4orf50Q6ZRC1 276 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 ALLCQ8N6M5 410 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 ZMIZ2Q8NF64 920 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 ACTL9Q8TC94 416 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-216ENST00000641375 TOX2Q96NM4 488 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 SNRNP25Q9BV90 132 aaKnown RBP17.15■□□□□ 0.34
PHGDH-216ENST00000641375 PNPLA8Q9NP80 782 aa17.15■□□□□ 0.34
PHGDH-216ENST00000641375 TET1Q8NFU7 2136 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 F8W810 466 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 KRT14P02533 472 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 IVDP26440 423 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 KLRC2P26717 231 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 ATN1P54259 1190 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-216ENST00000641375 DAOAP59103 153 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 OTUD4Q01804 1114 aaKnown RBP17.14■□□□□ 0.33
PHGDH-216ENST00000641375 SLMAPQ14BN4 828 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 OR10T2Q8NGX3 314 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 NT5C3BQ969T7 300 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 HAUS1Q96CS2 278 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 RNF157Q96PX1 679 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 SLC2A13Q96QE2 648 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 SH3GL2Q99962 352 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 ZNF670Q9BS34 389 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 ULBP1Q9BZM6 244 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 DMAP1Q9NPF5 467 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-216ENST00000641375 GEMIN8Q9NWZ8 242 aaKnown RBP17.14■□□□□ 0.33
PHGDH-216ENST00000641375 WBP1LQ9NX94 342 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 NLRC5Q86WI3 1866 aa17.14■□□□□ 0.33
PHGDH-216ENST00000641375 NDC80O14777 642 aa17.13■□□□□ 0.33
PHGDH-216ENST00000641375 TADA2AO75478 443 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms