RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 NME7Q9Y5B8 376 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 PCDHB6Q9Y5E3 794 aa10.36□□□□□ -0.75
PHGDH-212ENST00000641247 SCN1AP35498 2009 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 A0A1B0GVT2 93 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 ARHGAP6O43182 974 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 NDUFS2O75306 463 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 KIF20AO95235 890 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 NCAM1P13591 858 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 KRT10P13645 584 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 GNSP15586 552 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 BDNFP23560 247 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 CD6P30203 668 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 ADSSP30520 456 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 POLR2BP30876 1174 aaKnown RBP10.35□□□□□ -0.75
PHGDH-212ENST00000641247 CACNA2D1P54289 1103 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 PSMC1P62191 440 aaKnown RBP10.35□□□□□ -0.75
PHGDH-212ENST00000641247 GAD2Q05329 585 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 KYAT1Q16773 422 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 SOWAHAQ2M3V2 549 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 KIF19Q2TAC6 998 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 SV2CQ496J9 727 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 KCNT1Q5JUK3 1230 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 WDR45BQ5MNZ6 344 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 SYCP2LQ5T4T6 812 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 DCAF12L1Q5VU92 463 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 DENND5BQ6ZUT9 1274 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 BBS7Q8IWZ6 715 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 GALNT15Q8N3T1 639 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 KIAA1958Q8N8K9 716 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 C1orf127Q8N9H9 656 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 KCNV2Q8TDN2 545 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 MYLPFQ96A32 169 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 TOE1Q96GM8 510 aaKnown RBP10.35□□□□□ -0.75
PHGDH-212ENST00000641247 SPATA17Q96L03 361 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 PPP1R9BQ96SB3 815 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 HNRNPABQ99729 332 aaKnown RBP10.35□□□□□ -0.75
PHGDH-212ENST00000641247 TIPINQ9BVW5 301 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 TTLL2Q9BWV7 592 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 GPR174Q9BXC1 333 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 TRPM5Q9NZQ8 1165 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 SUSD2Q9UGT4 822 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 AGAP1Q9UPQ3 857 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 CFAP46Q8IYW2 2715 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 NAV2Q8IVL1 2488 aa10.35□□□□□ -0.75
PHGDH-212ENST00000641247 METTL12A8MUP2 240 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-212ENST00000641247 SLC9A3R1O14745 358 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-212ENST00000641247 ADH1CP00326 375 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 ABL1P00519 1130 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 ITGB3P05106 788 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 PLA2G4BP0C869 781 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 MBL2P11226 248 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-212ENST00000641247 PLCG1P19174 1290 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 GRIK1P39086 918 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 MATKP42679 507 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 MAGEA11P43364 429 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 CSNK1EP49674 416 aaKnown RBP10.34□□□□□ -0.75
PHGDH-212ENST00000641247 SEMG2Q02383 582 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 SRSF1Q07955 248 aaKnown RBP eCLIP10.34□□□□□ -0.752e-10■■■□□ 18.2
PHGDH-212ENST00000641247 TAF10Q12962 218 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 ORC2Q13416 577 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-212ENST00000641247 HYIQ5T013 277 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 KRT79Q5XKE5 535 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 MCTP1Q6DN14 999 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 CHPFQ8IZ52 775 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 KBTBD7Q8WVZ9 684 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 FOXJ1Q92949 421 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 FUBP3Q96I24 572 aaKnown RBP eCLIP10.34□□□□□ -0.75
PHGDH-212ENST00000641247 CDC6Q99741 560 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 MKRN2Q9H000 416 aaKnown RBP10.34□□□□□ -0.75
PHGDH-212ENST00000641247 ITM2CQ9NQX7 267 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 DEC1Q9P2X7 70 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 EIF2B4Q9UI10 523 aaKnown RBP10.34□□□□□ -0.75
PHGDH-212ENST00000641247 PCDHGB2Q9Y5G2 931 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 SNX11Q9Y5W9 270 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 SNX9Q9Y5X1 595 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 STYXL1Q9Y6J8 313 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 PLXND1Q9Y4D7 1925 aa10.34□□□□□ -0.75
PHGDH-212ENST00000641247 CBX4O00257 560 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 BCAT2O15382 392 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-212ENST00000641247 FLRT2O43155 660 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 HOXC11O43248 304 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-212ENST00000641247 COCHO43405 550 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 TNFSF14O43557 240 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 GREM1O60565 184 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 HUS1O60921 280 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 CISD3P0C7P0 127 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 HLA-EP13747 358 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 PFKLP17858 780 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 PGFP49763 221 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 GTF2BQ00403 316 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 MYL7Q01449 175 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 DNM1Q05193 864 aaKnown RBP10.33□□□□□ -0.76
PHGDH-212ENST00000641247 ANO4Q32M45 955 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 FOXD4L6Q3SYB3 417 aaPredicted RBP10.33□□□□□ -0.76
PHGDH-212ENST00000641247 ATL3Q6DD88 541 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 ADALQ6DHV7 355 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 LAYNQ6UX15 382 aa10.33□□□□□ -0.76
PHGDH-212ENST00000641247 KIAA1324Q6UXG2 1013 aaKnown RBP10.33□□□□□ -0.76
PHGDH-212ENST00000641247 FOXD4L3Q6VB84 417 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms